Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU214468 |
| length | 774 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G181197 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 14080499 ~ 14124923 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU214377 | lncRNA | downstream | 24884 | 14055408 ~ 14055615 (-) | True | G181128 |
| TU214309 | lncRNA | downstream | 360742 | 13718323 ~ 13719757 (-) | True | G181062 |
| TU214285 | lncRNA | downstream | 510330 | 13546956 ~ 13570169 (-) | False | ptprsa |
| TU214294 | lncRNA | downstream | 558778 | 13510451 ~ 13521721 (-) | True | G181047 |
| TU214092 | lncRNA | downstream | 650326 | 13426731 ~ 13430173 (-) | True | G180877 |
| TU214476 | lncRNA | upstream | 11531 | 14136454 ~ 14136955 (-) | True | G181205 |
| TU214483 | lncRNA | upstream | 31580 | 14156503 ~ 14203731 (-) | True | G181207 |
| TU214582 | lncRNA | upstream | 310378 | 14435301 ~ 14435614 (-) | True | G181298 |
| TU214672 | lncRNA | upstream | 312478 | 14437401 ~ 14438034 (-) | False | zfr2 |
| TU214671 | lncRNA | upstream | 312625 | 14437548 ~ 14438034 (-) | False | zfr2 |
| XM_026943826.2 | mRNA | downstream | 297372 | 13546914 ~ 13783127 (-) | False | ptprsa |
| XM_026943911.2 | mRNA | downstream | 297372 | 13546914 ~ 13783127 (-) | True | ptprsa |
| XM_034308608.1 | mRNA | downstream | 352422 | 13546914 ~ 13728077 (-) | False | ptprsa |
| XM_034308598.1 | mRNA | downstream | 352422 | 13546914 ~ 13728077 (-) | False | ptprsa |
| XM_034308605.1 | mRNA | downstream | 352422 | 13546914 ~ 13728077 (-) | False | ptprsa |
| XM_034308945.1 | mRNA | upstream | 40243 | 14165166 ~ 14179580 (-) | True | uhrf1 |
| XM_026913208.2 | mRNA | upstream | 116380 | 14241303 ~ 14317837 (-) | True | fbn2b |
| XM_026915563.2 | mRNA | upstream | 233597 | 14358520 ~ 14361382 (-) | True | LOC113527598 |
| XM_026915579.2 | mRNA | upstream | 237400 | 14362323 ~ 14374028 (-) | False | rad23ab |
| XM_026915587.2 | mRNA | upstream | 237400 | 14362323 ~ 14374015 (-) | False | rad23ab |
| TU214009 | other | downstream | 837337 | 13239749 ~ 13243162 (-) | False | rpp21 |
| trnam-cau_27 | other | downstream | 844024 | 13236403 ~ 13236475 (-) | True | trnam-cau_27 |
| TU213621 | other | downstream | 1360023 | 12717361 ~ 12720476 (-) | True | G180485 |
| TU212758 | other | downstream | 2576537 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU212749 | other | downstream | 2665059 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU214564 | other | upstream | 236013 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| XR_004579086.1 | other | upstream | 283803 | 14408726 ~ 14415069 (-) | False | rx1 |
| XR_003402957.2 | other | upstream | 314931 | 14439854 ~ 14460337 (-) | False | zfr2 |
| XR_004579061.1 | other | upstream | 428232 | 14553155 ~ 14579747 (-) | False | lama3 |
| TU215666 | other | upstream | 1565851 | 15690774 ~ 15692350 (-) | True | G182210 |
