G181128


Basic Information

Item Value
gene id G181128
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 14055408 ~ 14055615 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU214377
gtgaaaagcatgctctattgggttgagatcaggtgactgacttggccattgaagaatattccatttctttgccttcaaaaagtcttgagttgctttcgcagtatgtttagggtcattatccacctgcactgtgaagtggcgtcctatcagttttgtagcatttggctgaatgtgagcagagagtatagccctatacacctcagaattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214377 True 208 lncRNA 0.43 1 14055408 14055615

Neighbor

gene id symbol gene type direction distance location
tbxa2r nup160,LOC108271239 coding downstream 527644 13516683 ~ 13527764 (-)
si:zfos-943e10.1 LOC108270864,LOC103026993 coding downstream 564234 13470587 ~ 13491174 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847 coding downstream 608481 13432083 ~ 13446927 (-)
lmnb2 lmnb2 coding downstream 630986 13405769 ~ 13424422 (-)
ing5a ing5,LOC108424972,LOC105898337 coding downstream 737813 13310779 ~ 13317595 (-)
kdm4b kdm4b,LOC108271011,LOC107717157,LOC105011321,LOC106574093 coding upstream 42039 14097654 ~ 14160605 (-)
uhrf1 uhrf1 coding upstream 109551 14165166 ~ 14179580 (-)
fbn2b fbn3,fbn2b,LOC108441289,LOC106573567,LOC106613712 coding upstream 185688 14241303 ~ 14317837 (-)
rad23ab LOC108271249,LOC107704496,LOC107717165 coding upstream 306708 14362323 ~ 14374028 (-)
calr3a calr3,calr3a,LOC107702625,LOC107717161,LOC107561598 coding upstream 319870 14375485 ~ 14382765 (-)
G181062 NA non-coding downstream 335651 13718323 ~ 13719757 (-)
G181047 NA non-coding downstream 533687 13510451 ~ 13521721 (-)
G180877 NA non-coding downstream 625235 13426731 ~ 13430173 (-)
G180819 NA non-coding downstream 782466 13251418 ~ 13272942 (-)
G180793 NA non-coding downstream 879388 13094163 ~ 13176020 (-)
G181197 NA non-coding upstream 24884 14080499 ~ 14124923 (-)
G181205 NA non-coding upstream 80839 14136454 ~ 14136955 (-)
G181207 NA non-coding upstream 100888 14156503 ~ 14203731 (-)
G181298 NA non-coding upstream 379686 14435301 ~ 14435614 (-)
G181401 NA non-coding upstream 425914 14481529 ~ 14483184 (-)
ptprsa ptprs,ptprd,LOC107559826,LOC107679075 other downstream 272281 13546914 ~ 13783127 (-)
rpp21 LOC108271386 other downstream 812208 13239723 ~ 13243200 (-)
rc3h1a rc3h1,LOC108429496 other downstream 1272873 12752078 ~ 12782535 (-)
G180485 s1pr1,LOC107715096,LOC107592715 other downstream 1334932 12717361 ~ 12720476 (-)
ncln ncln other downstream 2023402 12020412 ~ 12032006 (-)
LOC113527598 LOC108271251,LOC108441295,LOC107742801 other upstream 302905 14358520 ~ 14361647 (-)
rx1 LOC108270609 other upstream 353111 14408726 ~ 14415069 (-)
zfr2 zfr2,LOC108271074,LOC107742797,LOC108430234 other upstream 381745 14437360 ~ 14460337 (-)
LOC113532209 LOC108271183 other upstream 431505 14487120 ~ 14493859 (-)
tnfaip8l1 tnfaip8l1,LOC107702643,LOC107727554,LOC107698600 other upstream 441535 14497150 ~ 14507610 (-)

Expression


Co-expression Network