ing5a (ing5,LOC108424972,LOC105898337)


Basic Information

Item Value
gene id ing5a
gene name ing5,LOC108424972,LOC105898337
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 13310779 ~ 13317595 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927657.2
TCGTATACCAATGTTGTTCTACTTCATGCGCGCTGGcgctgacagaaaaaaaaaacaagctacatttttaacTTGAAGGTTGATGATAATGGCGACGGCGATATACCTCGAACACTATCTTGACAGCATTGAAAATTTGCCATGTGAACTACAGAGGAACTTCACCCTGATGCGGGAGCTGGACAACAGGACAGAGGAAAAGAAGGGAGAGATCGATAAACTCGCCGAAGAGTACATCACAAACGTCCGGAACCTTGCGTCTGAGCAGAGGGTGGAACATCTGCAGAAGATTCAGAGCGCCTATAGCAAATGTAAAGAATATAGTGATGACAAAGTGCAGCTTGCCATGCAGACATATGAAATGGTTGACAAGCACATCCGAAGGCTGGATGCAGACCTGGCCCGCTTTGAGAATGAGCTAAAAGAGAAGCTGGATGTCAGTGGTTATGAGAGCCCTGAGAGTAGAGCACTAAAAAaaggaGGAGGCAGAGGGTTTAAGGATAAGCGAGGATCTAAAGGCAGAGGAAGAAAATGCTCAGATGATGACTCACCgcgaaagaaaaaaatgaaaaacagTCCTGATTTCCAGGAGTCCCTGCTGCCGGTGCACCCATCAGATGTCCTGGACATGCCAGTGGACCCCAATGAGCCCACATACTGTTTGTGCCATCAGGTGTCATATGGAGAAATGATTGGATGTGACAACCCTGATtgtccAATCGAATGGTTTCACTTTGCATGTGTGGATCTCACAACAAAGCCCAAAGGAAAATGGTTTTGTCCGCGGTGCACCCAGGATCGGAAGAAAAAATAAGATTTCTAACTCTATGACTTTTATACATAActgtatgcatatatatgtattttgtcTATGTGGTAAAATAGGAtactatgtacagtataaatatatcaCTTTCTATATGACTATGATAAAGGAAGAGAGGGTCACAATGAAAcaaaacctttattttttaatgtacttgaaatgtgtctgttttgttatttcaaaaaaaagttgaatattGTACTGCAAGTAATCTggtatctattttatttttattttctatggAAAGTGTAAGcttacatgtgtatatatacacacttctACTGAATTAGCAACATAGGATTTCTTGCTAAATGAAGTCAAAGCACCAAAATCATTGTTCTTGCaacttcatttttaatatttacatgctGAAATGTTGTTAATGCCTCAAAAAAACATTCACGGCAAGAATTTAAGTTATGAGGATTTTATTTTGAACGTAAATGTTAAAGATGCCATGTGCAGCTGTCCTGCTGGATGTCGTATCtttagaggaaaaaagtgtTTATGACGTGACTACTTCTGTAACTCCATCCGGATGAACAACAGCTCATCTGTGTTACGTGTGTACTAACGGCTGCTGTTTTGGCAGAATCGGACTTTTCCTCCACCAGCTTTgatgcactttttcttttaaccAGAATTTGTTCCCTTGAGCACCATGACCAAGGCCTGTGTTCTCAGTAGTGTTTCAGAGGAGGGGTCAGGTCTCGGATCAGCTGTCCTGCTATGTCGTTTTGTTCATTAAACAACCTCTGGTCATGCATGTGTCCTAGAATGGAGGAACTCAGTCCTTAAGGAAATAAggggaccaaaaaaaaaaagaatccaatGAAGACCATAAATGCAGATCATCTTTGATGGGTTATTTGTGATGTTTGTATGTCAATCATAAATTAATACCCTGAATCAATACTCCTGCAAGATACTTTATTGCTCTGTATTTGagtttacatttgtaaatgtaactgAGTTTAAAATAACCCTAAGCATGGTGGTTTTATGATTACATCCCTACAGTCCACACGCTGGACAAAGTGTGCAACCTGTCTGCAGcatgaattttatttcttttttttaactgaactaAAAATCTGATTGGAAAATAGGCTTctggtttagggttagggttcttacagtttttacacctgtgtttttatttttttgtagggTTTGAGACACTTCTTTGCATCATCATAAAATCTGGATTTATTAAATGTACGTGCTGCTGTT
>XM_026927665.2
ttattttttttagggaaaaaacatCTGGCGCTCATGAGGGCTTTTGGTGGCTTCGCAACGCAGTCGGCGCAAGcgagctaagctaagctaactaTAAGGCTGGCCTGGTGATACTGAAATATCTGTCGAGTTGGCATTGAAAATTTGCCATGTGAACTACAGAGGAACTTCACCCTGATGCGGGAGCTGGACAACAGGACAGAGGAAAAGAAGGGAGAGATCGATAAACTCGCCGAAGAGTACATCACAAACGTCCGGAACCTTGCGTCTGAGCAGAGGGTGGAACATCTGCAGAAGATTCAGAGCGCCTATAGCAAATGTAAAGAATATAGTGATGACAAAGTGCAGCTTGCCATGCAGACATATGAAATGGTTGACAAGCACATCCGAAGGCTGGATGCAGACCTGGCCCGCTTTGAGAATGAGCTAAAAGAGAAGCTGGATGTCAGTGGTTATGAGAGCCCTGAGAGTAGAGCACTAAAAAaaggaGGAGGCAGAGGGTTTAAGGATAAGCGAGGATCTAAAGGCAGAGGAAGAAAATGCTCAGATGATGACTCACCgcgaaagaaaaaaatgaaaaacagTCCTGATTTCCAGGAGTCCCTGCTGCCGGTGCACCCATCAGATGTCCTGGACATGCCAGTGGACCCCAATGAGCCCACATACTGTTTGTGCCATCAGGTGTCATATGGAGAAATGATTGGATGTGACAACCCTGATtgtccAATCGAATGGTTTCACTTTGCATGTGTGGATCTCACAACAAAGCCCAAAGGAAAATGGTTTTGTCCGCGGTGCACCCAGGATCGGAAGAAAAAATAAGATTTCTAACTCTATGACTTTTATACATAActgtatgcatatatatgtattttgtcTATGTGGTAAAATAGGAtactatgtacagtataaatatatcaCTTTCTATATGACTATGATAAAGGAAGAGAGGGTCACAATGAAAcaaaacctttattttttaatgtacttgaaatgtgtctgttttgttatttcaaaaaaaagttgaatattGTACTGCAAGTAATCTggtatctattttatttttattttctatggAAAGTGTAAGcttacatgtgtatatatacacacttctACTGAATTAGCAACATAGGATTTCTTGCTAAATGAAGTCAAAGCACCAAAATCATTGTTCTTGCaacttcatttttaatatttacatgctGAAATGTTGTTAATGCCTCAAAAAAACATTCACGGCAAGAATTTAAGTTATGAGGATTTTATTTTGAACGTAAATGTTAAAGATGCCATGTGCAGCTGTCCTGCTGGATGTCGTATCtttagaggaaaaaagtgtTTATGACGTGACTACTTCTGTAACTCCATCCGGATGAACAACAGCTCATCTGTGTTACGTGTGTACTAACGGCTGCTGTTTTGGCAGAATCGGACTTTTCCTCCACCAGCTTTgatgcactttttcttttaaccAGAATTTGTTCCCTTGAGCACCATGACCAAGGCCTGTGTTCTCAGTAGTGTTTCAGAGGAGGGGTCAGGTCTCGGATCAGCTGTCCTGCTATGTCGTTTTGTTCATTAAACAACCTCTGGTCATGCATGTGTCCTAGAATGGAGGAACTCAGTCCTTAAGGAAATAAggggaccaaaaaaaaaaagaatccaatGAAGACCATAAATGCAGATCATCTTTGATGGGTTATTTGTGATGTTTGTATGTCAATCATAAATTAATACCCTGAATCAATACTCCTGCAAGATACTTTATTGCTCTGTATTTGagtttacatttgtaaatgtaactgAGTTTAAAATAACCCTAAGCATGGTGGTTTTATGATTACATCCCTACAGTCCACACGCTGGACAAAGTGTGCAACCTGTCTGCAGcatgaattttatttcttttttttaactgaactaAAAATCTGATTGGAAAATAGGCTTctggtttagggttagggttcttacagtttttacacctgtgtttttatttttttgtagggTTTGAGACACTTCTTTGCATCATCATAAAATCTGGATTTATTAAATGTACGTGCTGCTGTT

Function

symbol description
ing5 Enables methylated histone binding activity. Involved in several processes, including DNA replication; histone acetylation; and positive regulation of transcription, DNA-templated. Acts upstream of or within positive regulation of apoptotic process. Located in nucleus. Part of MOZ/MORF histone acetyltransferase complex.

NR:

description
PREDICTED: inhibitor of growth protein 5

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11345 ING5; inhibitor of growth protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927657.2 False 2059 mRNA 0.39 8 13310779 13317595
XM_026927665.2 True 2067 mRNA 0.39 8 13310779 13317419

Neighbor

gene id symbol gene type direction distance location
pigx pigx coding downstream 2462 13303501 ~ 13308317 (-)
pak2b pak2,LOC107741800,LOC107678112,LOC107679089 coding downstream 8413 13286632 ~ 13302366 (-)
trnam-cau_27 NA coding downstream 74304 13236403 ~ 13236475 (-)
gpc5b LOC108270519 coding downstream 79656 13158387 ~ 13231123 (-)
gpc1a gpc1,LOC108424978 coding downstream 154761 13111812 ~ 13156018 (-)
lmnb2 lmnb2 coding upstream 88174 13405769 ~ 13424422 (-)
lonp1 lonp1,LOC107744642,LOC107679084,LOC107548847 coding upstream 114488 13432083 ~ 13446927 (-)
si:zfos-943e10.1 LOC108270864,LOC103026993 coding upstream 152992 13470587 ~ 13491174 (-)
tbxa2r nup160,LOC108271239 coding upstream 199088 13516683 ~ 13527764 (-)
kdm4b kdm4b,LOC108271011,LOC107717157,LOC105011321,LOC106574093 coding upstream 780059 14097654 ~ 14160605 (-)
G180819 NA non-coding downstream 37837 13251418 ~ 13272942 (-)
G180793 NA non-coding downstream 134759 13094163 ~ 13176020 (-)
G180783 tpm4,tpm1,LOC103156889,LOC106946143,LOC106929302 non-coding downstream 183341 13069936 ~ 13127438 (-)
G180628 NA non-coding downstream 262079 12989773 ~ 13048700 (-)
G180627 NA non-coding downstream 323256 12986787 ~ 12987523 (-)
G180877 NA non-coding upstream 109136 13426731 ~ 13430173 (-)
G181047 NA non-coding upstream 192856 13510451 ~ 13521721 (-)
G181062 NA non-coding upstream 400728 13718323 ~ 13719757 (-)
G181128 NA non-coding upstream 737813 14055408 ~ 14055615 (-)
G181197 NA non-coding upstream 762904 14080499 ~ 14124923 (-)
rpp21 LOC108271386 other downstream 67579 13239723 ~ 13243200 (-)
rc3h1a rc3h1,LOC108429496 other downstream 528244 12752078 ~ 12782535 (-)
G180485 s1pr1,LOC107715096,LOC107592715 other downstream 590303 12717361 ~ 12720476 (-)
ncln ncln other downstream 1278773 12020412 ~ 12032006 (-)
fxr1 fxr1 other downstream 1421630 11862989 ~ 11889149 (-)
ptprsa ptprs,ptprd,LOC107559826,LOC107679075 other upstream 229319 13546914 ~ 13783127 (-)
LOC113527598 LOC108271251,LOC108441295,LOC107742801 other upstream 1040925 14358520 ~ 14361647 (-)
rx1 LOC108270609 other upstream 1091131 14408726 ~ 14415069 (-)
zfr2 zfr2,LOC108271074,LOC107742797,LOC108430234 other upstream 1119765 14437360 ~ 14460337 (-)
LOC113532209 LOC108271183 other upstream 1169525 14487120 ~ 14493859 (-)

Expression


Co-expression Network