Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU485414 |
| length | 1003 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G408906 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 6391195 ~ 6681409 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU485373 | lncRNA | upstream | 15613 | 6374374 ~ 6375582 (+) | True | G408892 |
| TU485377 | lncRNA | upstream | 19617 | 6370506 ~ 6371578 (+) | False | G408893 |
| TU485371 | lncRNA | upstream | 34016 | 6317383 ~ 6357179 (+) | True | LOC117596601 |
| TU485405 | lncRNA | upstream | 35593 | 6352887 ~ 6355602 (+) | True | G408899 |
| TU485369 | lncRNA | upstream | 37401 | 6305997 ~ 6353794 (+) | True | G408888 |
| TU485393 | lncRNA | downstream | 83502 | 6764911 ~ 7071033 (+) | True | LOC117596594 |
| XR_004577654.1 | lncRNA | downstream | 113783 | 6795192 ~ 6796340 (+) | True | LOC117596596 |
| XR_003403035.2 | lncRNA | downstream | 197229 | 6878638 ~ 6880233 (+) | True | LOC113529310 |
| XR_004577647.1 | lncRNA | downstream | 247191 | 6928600 ~ 6931893 (+) | True | LOC117596589 |
| TU485502 | lncRNA | downstream | 247643 | 6929052 ~ 6929618 (+) | False | LOC117596589 |
| XM_034301889.1 | mRNA | upstream | 6971 | 6380073 ~ 6384224 (+) | True | LOC117596543 |
| XM_034302068.1 | mRNA | upstream | 22412 | 6363164 ~ 6368783 (+) | True | LOC117596580 |
| XM_034302062.1 | mRNA | upstream | 81942 | 6248061 ~ 6309253 (+) | True | LOC117596576 |
| XM_026918432.2 | mRNA | upstream | 342673 | 6034549 ~ 6048522 (+) | True | ivns1abpa |
| XM_026917970.2 | mRNA | upstream | 481300 | 5903579 ~ 5909895 (+) | True | arpc5b |
| XM_034301831.1 | mRNA | downstream | 751079 | 7432488 ~ 7497053 (+) | False | LOC113529075 |
| XM_034301830.1 | mRNA | downstream | 751080 | 7432489 ~ 7497053 (+) | True | LOC113529075 |
| XM_026918030.1 | mRNA | downstream | 839039 | 7520448 ~ 7525893 (+) | True | nrl |
| XM_026917456.2 | mRNA | downstream | 848818 | 7530227 ~ 7546810 (+) | True | LOC113528764 |
| XM_026917457.2 | mRNA | downstream | 848844 | 7530253 ~ 7546810 (+) | False | LOC113528764 |
| XR_004577658.1 | other | upstream | 114530 | 6272032 ~ 6276665 (+) | True | LOC117596600 |
| trnag-gcc_30 | other | upstream | 648333 | 5742792 ~ 5742862 (+) | True | trnag-gcc_30 |
| TU485026 | other | upstream | 654934 | 5733795 ~ 5736261 (+) | False | lyrm2 |
| XR_004577669.1 | other | upstream | 1731500 | 4655964 ~ 4659695 (+) | True | LOC113529331 |
| TU485391 | other | downstream | 168097 | 6849506 ~ 6851954 (+) | False | LOC117596594 |
| TU486240 | other | downstream | 1196386 | 7877795 ~ 7878545 (+) | True | G409600 |
| TU487747 | other | downstream | 3496640 | 10178049 ~ 10182672 (+) | True | G410936 |
| TU488185 | other | downstream | 4082805 | 10764214 ~ 10764729 (+) | True | G411297 |
| XR_004577598.1 | other | downstream | 4434214 | 11115623 ~ 11147509 (+) | False | aig1 |
