Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU486788 |
| length | 360 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G410072 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 8722835 ~ 8723194 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU486786 | lncRNA | upstream | 677 | 8721941 ~ 8722158 (+) | True | G410070 |
| TU486781 | lncRNA | upstream | 3895 | 8717922 ~ 8718940 (+) | True | G410065 |
| TU486777 | lncRNA | upstream | 20451 | 8701950 ~ 8702384 (+) | True | G410061 |
| TU486702 | lncRNA | upstream | 193787 | 8527727 ~ 8529048 (+) | True | G409997 |
| TU486700 | lncRNA | upstream | 194001 | 8527621 ~ 8528834 (+) | False | G409997 |
| TU486790 | lncRNA | downstream | 947 | 8724141 ~ 8724345 (+) | True | G410074 |
| TU486791 | lncRNA | downstream | 1507 | 8724701 ~ 8725224 (+) | True | G410075 |
| TU486800 | lncRNA | downstream | 13442 | 8736636 ~ 8736845 (+) | True | G410084 |
| TU486873 | lncRNA | downstream | 143551 | 8866745 ~ 8867271 (+) | True | G410145 |
| TU486978 | lncRNA | downstream | 379705 | 9102899 ~ 9104116 (+) | False | LOC113529148 |
| XM_026917797.2 | mRNA | upstream | 31131 | 8678600 ~ 8691704 (+) | True | slc22a16 |
| XM_026918575.2 | mRNA | upstream | 95071 | 8606208 ~ 8627764 (+) | True | cdc40 |
| XM_026918442.2 | mRNA | upstream | 206278 | 8514764 ~ 8516557 (+) | True | LOC113529322 |
| XM_026917333.2 | mRNA | upstream | 214138 | 8457789 ~ 8508697 (+) | False | fig4a |
| XM_026918139.2 | mRNA | downstream | 375183 | 9098377 ~ 9104224 (+) | False | LOC113529148 |
| XM_026918140.2 | mRNA | downstream | 377740 | 9100934 ~ 9104224 (+) | True | LOC113529148 |
| XM_034302088.1 | mRNA | downstream | 664636 | 9387830 ~ 9442474 (+) | False | LOC113528867 |
| XM_026917642.2 | mRNA | downstream | 664636 | 9387830 ~ 9442474 (+) | True | LOC113528867 |
| XM_026917644.2 | mRNA | downstream | 664637 | 9387831 ~ 9442474 (+) | False | LOC113528867 |
| TU486240 | other | upstream | 844290 | 7877795 ~ 7878545 (+) | True | G409600 |
| TU485391 | other | upstream | 1870881 | 6849506 ~ 6851954 (+) | False | LOC117596594 |
| TU485379 | other | upstream | 1927615 | 6483101 ~ 6795220 (+) | True | G408893 |
| TU485443 | other | upstream | 2159059 | 6556363 ~ 6563776 (+) | True | G408929 |
| XR_004577658.1 | other | upstream | 2446170 | 6272032 ~ 6276665 (+) | True | LOC117596600 |
| TU487747 | other | downstream | 1454855 | 10178049 ~ 10182672 (+) | True | G410936 |
| TU488185 | other | downstream | 2041020 | 10764214 ~ 10764729 (+) | True | G411297 |
| XR_004577598.1 | other | downstream | 2392429 | 11115623 ~ 11147509 (+) | False | aig1 |
| XR_004577599.1 | other | downstream | 2392430 | 11115624 ~ 11145680 (+) | False | aig1 |
| XR_004577621.1 | other | downstream | 2667306 | 11390500 ~ 11418204 (+) | False | txlnba |
