Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004852 |
| length | 1170 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 10 |
| gene id | AMCG00004852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 5800413 ~ 5816834 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0030170 | pyridoxal phosphate binding | molecular_function |
| GO:0016829 | lyase activity | molecular_function |
| id | description |
|---|---|
| K01758 | CTH; cystathionine gamma-lyase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU180625 | lncRNA | upstream | 338559 | 5461492 ~ 5461854 (+) | True | G143630 |
| TU180496 | lncRNA | upstream | 942249 | 4852163 ~ 4858164 (+) | True | G143526 |
| TU180401 | lncRNA | upstream | 1548324 | 4251709 ~ 4252089 (+) | True | G143447 |
| TU180391 | lncRNA | upstream | 1561553 | 4218037 ~ 4238860 (+) | True | G143440 |
| TU180364 | lncRNA | upstream | 1666504 | 4133455 ~ 4133909 (+) | False | G143414 |
| TU180738 | lncRNA | downstream | 683402 | 6500236 ~ 6500721 (+) | True | G143721 |
| TU180800 | lncRNA | downstream | 818224 | 6635058 ~ 6635410 (+) | True | G143772 |
| TU180866 | lncRNA | downstream | 1792067 | 7608901 ~ 7609824 (+) | False | AMCG00004864 |
| TU180890 | lncRNA | downstream | 1855982 | 7672816 ~ 7692264 (+) | False | AMCG00004868 |
| TU181008 | lncRNA | downstream | 2056779 | 7873613 ~ 7874434 (+) | True | G143923 |
| AMCG00004850 | mRNA | upstream | 4020 | 5780974 ~ 5796393 (+) | True | AMCG00004850 |
| AMCG00004849 | mRNA | upstream | 56078 | 5743931 ~ 5744335 (+) | True | AMCG00004849 |
| AMCG00004851 | mRNA | upstream | 59895 | 5730970 ~ 5740518 (+) | True | AMCG00004851 |
| AMCG00004845 | mRNA | upstream | 74203 | 5724587 ~ 5726210 (+) | True | AMCG00004845 |
| AMCG00004847 | mRNA | upstream | 92462 | 5657744 ~ 5707951 (+) | True | AMCG00004847 |
| AMCG00004856 | mRNA | downstream | 500067 | 6316901 ~ 6330455 (+) | True | AMCG00004856 |
| AMCG00004855 | mRNA | downstream | 709796 | 6526630 ~ 6535844 (+) | True | AMCG00004855 |
| AMCG00004862 | mRNA | downstream | 1351158 | 7167992 ~ 7178903 (+) | True | AMCG00004862 |
| AMCG00004863 | mRNA | downstream | 1373521 | 7190355 ~ 7219055 (+) | True | AMCG00004863 |
| AMCG00004864 | mRNA | downstream | 1792303 | 7609137 ~ 7624070 (+) | True | AMCG00004864 |
| TU180621 | other | upstream | 376292 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 1428324 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU180351 | other | upstream | 1690758 | 4109022 ~ 4109655 (+) | True | G143404 |
| TU180311 | other | upstream | 1850576 | 3949426 ~ 3949837 (+) | True | G143366 |
| TU180140 | other | upstream | 2405255 | 3377815 ~ 3395158 (+) | True | AMCG00004793 |
| TU180912 | other | downstream | 1912555 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU181952 | other | downstream | 5845847 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU182286 | other | downstream | 6963746 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU183002 | other | downstream | 9567409 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 11948423 | 17765257 ~ 17771525 (+) | True | G145932 |
