RNA id: TU66751



Basic Information


Item Value
RNA id TU66751
length 311
RNA type TUCP
GC content 0.63
exon number 1
gene id G53355
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 17868386 ~ 17868696 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCCCAAGCTCGTCCTCCACGTTGATGATCTCGATGGCACGGGCTGGGCCATGGTGCTTGTGCAGCTGGTGCTGTTTGCGCAGCTTGTAGAAGACCACCAGCATGACGGCAGCCATGAAGGTGATGGCGACGAAGCAGCCAATGATGATCTTGGTCGTCTTCATGACGTCGTCCAAGCCGGACACGTTTTCGGATATTTCGGTGACAGGCACGGTGAAGGCCCTCTCAGTGGAGCGGGGCGAGCGTGAGGAGGAGGCCGAGGCCGAGGCGGCAGCGGGGGAGTGGGAGAGGGccgaggaggaggtggtggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66673 lncRNA downstream 213178 17654125 ~ 17655208 (-) True G53286
TU66564 lncRNA downstream 524604 17343442 ~ 17343782 (-) True G53188
TU66529 lncRNA downstream 758675 17109061 ~ 17109711 (-) True G53156
TU66518 lncRNA downstream 786321 17081678 ~ 17082065 (-) True G53147
TU66513 lncRNA downstream 806835 17060808 ~ 17061551 (-) True G53142
TU66819 lncRNA upstream 215551 18084247 ~ 18084482 (-) True G53411
TU66834 lncRNA upstream 234026 18102722 ~ 18113638 (-) True G53425
TU66837 lncRNA upstream 262784 18131480 ~ 18131785 (-) True G53428
TU66903 lncRNA upstream 438741 18307437 ~ 18307999 (-) True G53478
TU66975 lncRNA upstream 733017 18601713 ~ 18601951 (-) True G53543
AMCG00009001 mRNA downstream 126604 17724719 ~ 17741782 (-) True AMCG00009001
AMCG00008999 mRNA downstream 203650 17655595 ~ 17664736 (-) True AMCG00008999
AMCG00009000 mRNA downstream 241603 17615728 ~ 17626783 (-) True AMCG00009000
AMCG00008998 mRNA downstream 257028 17601832 ~ 17611358 (-) True AMCG00008998
AMCG00008994 mRNA downstream 647945 17205090 ~ 17220441 (-) True AMCG00008994
AMCG00009015 mRNA upstream 282167 18150863 ~ 18151365 (-) True AMCG00009015
AMCG00009012 mRNA upstream 307199 18175895 ~ 18208537 (-) True AMCG00009012
AMCG00009013 mRNA upstream 355151 18223847 ~ 18253002 (-) True AMCG00009013
AMCG00009011 mRNA upstream 403922 18272618 ~ 18288172 (-) True AMCG00009011
AMCG00009018 mRNA upstream 508738 18377434 ~ 18382391 (-) True AMCG00009018
TU66702 other downstream 121343 17736589 ~ 17747043 (-) False AMCG00009001
TU66472 other downstream 955087 16853029 ~ 16913299 (-) False AMCG00008989
TU66358 other downstream 1253925 16613224 ~ 16614461 (-) True G53017
TU66281 other downstream 1463260 16404710 ~ 16405126 (-) True G52951
TU66179 other downstream 1794451 16064225 ~ 16073935 (-) True AMCG00008971
TU67292 other upstream 2332051 20200747 ~ 20264085 (-) True G53809
TU67291 other upstream 2384208 20252904 ~ 20264085 (-) False G53809
TU67499 other upstream 4314392 22183088 ~ 22183565 (-) True G54003
TU68185 other upstream 7284570 25153266 ~ 25156338 (-) True G54544
TU68195 other upstream 7304981 25173677 ~ 25176378 (-) True AMCG00009100

Expression Profile