RNA id: AMCG00021259


Basic Information

Item Value
RNA id AMCG00021259
length 345
RNA type mRNA
GC content 0.48
exon number 4
gene id AMCG00021259
representative False

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12719864 ~ 12801586 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACTTTTTCTACTTCAGTACAAGTCAACGTGTCCTTGTTATCTTTGATTGCCATGATTGACAACAGTTGGGAGGCTgtgaaagaaaaccacaagaagagGGAAATGGAGGAGAAGATCAAGAGAGCAAAACTGGCAAAGGAGAAAGCCGAGCGAGAGAAGCAGGAGCGCcagcagaagaagaagcaaCTGATTGACATGAACAAAGAGGGAGATGAGACTGGAGTGATGGACAGTCTCATGGAGGCTCTACAATCTGGGGCAGCCTTCCGCGACAGGAGAAAACGAACACCGCGTAATGCCatggagagggaagagagacaAATGTCTGAGATCCTGTGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105813 lncRNA downstream 104302 12663009 ~ 12663319 (-) True G84822
TU105803 lncRNA downstream 264119 12500240 ~ 12503502 (-) True G84812
TU105774 lncRNA downstream 564794 12198777 ~ 12202827 (-) True G84785
TU105763 lncRNA downstream 624258 12141960 ~ 12143363 (-) True G84780
TU105760 lncRNA downstream 634464 12131302 ~ 12133157 (-) True G84778
TU106048 lncRNA upstream 961872 13751206 ~ 13755469 (-) True G85003
TU106057 lncRNA upstream 1047253 13836587 ~ 13837073 (-) True G85009
TU106060 lncRNA upstream 1068970 13858304 ~ 13862544 (-) True G85012
TU106061 lncRNA upstream 1068970 13858304 ~ 13862472 (-) False G85012
TU106062 lncRNA upstream 1070954 13860288 ~ 13862472 (-) False G85012
AMCG00021257 mRNA downstream 543313 12207338 ~ 12224308 (-) True AMCG00021257
AMCG00021252 mRNA downstream 636684 12127083 ~ 12130937 (-) True AMCG00021252
AMCG00021253 mRNA downstream 640776 12122220 ~ 12126845 (-) True AMCG00021253
AMCG00021249 mRNA downstream 666767 12093477 ~ 12100854 (-) True AMCG00021249
AMCG00021251 mRNA downstream 835824 11884997 ~ 11931797 (-) True AMCG00021251
AMCG00021260 mRNA upstream 121233 12910567 ~ 12916125 (-) True AMCG00021260
AMCG00021258 mRNA upstream 255127 13044461 ~ 13090655 (-) True AMCG00021258
AMCG00021261 mRNA upstream 397111 13186445 ~ 13192008 (-) True AMCG00021261
AMCG00021268 mRNA upstream 618028 13407362 ~ 13410923 (-) True AMCG00021268
AMCG00021274 mRNA upstream 649408 13438742 ~ 13441143 (-) True AMCG00021274
TU105805 other downstream 239927 12527093 ~ 12527694 (-) True G84814
TU104623 other downstream 6221044 6544492 ~ 6546577 (-) True G83864
TU104502 other downstream 8016386 4748781 ~ 4751235 (-) False G83761
TU104173 other downstream 10085859 2681560 ~ 2681762 (-) False AMCG00021090
TU104110 other downstream 10308242 2457001 ~ 2459379 (-) True G83428
TU105989 other upstream 838001 13627335 ~ 13627747 (-) True G84952
TU106093 other upstream 1080605 13869939 ~ 13917868 (-) True G85037
TU106219 other upstream 1260640 14049974 ~ 14051897 (-) True G85115
TU106928 other upstream 3451670 16241004 ~ 16242655 (-) False AMCG00021387
TU107075 other upstream 3857805 16647139 ~ 16649825 (-) False AMCG00021412

Expression Profile