Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021274 |
| length | 1122 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | AMCG00021274 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 13438742 ~ 13441143 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0015693 | magnesium ion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0015095 | magnesium ion transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K22733 | NIPA, SLC57A2S; magnesium transporter |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105813 | lncRNA | downstream | 775423 | 12663009 ~ 12663319 (-) | True | G84822 |
| TU105803 | lncRNA | downstream | 935240 | 12500240 ~ 12503502 (-) | True | G84812 |
| TU105774 | lncRNA | downstream | 1235915 | 12198777 ~ 12202827 (-) | True | G84785 |
| TU105763 | lncRNA | downstream | 1295379 | 12141960 ~ 12143363 (-) | True | G84780 |
| TU105760 | lncRNA | downstream | 1305585 | 12131302 ~ 12133157 (-) | True | G84778 |
| TU106048 | lncRNA | upstream | 310063 | 13751206 ~ 13755469 (-) | True | G85003 |
| TU106057 | lncRNA | upstream | 395444 | 13836587 ~ 13837073 (-) | True | G85009 |
| TU106060 | lncRNA | upstream | 417161 | 13858304 ~ 13862544 (-) | True | G85012 |
| TU106061 | lncRNA | upstream | 417161 | 13858304 ~ 13862472 (-) | False | G85012 |
| TU106062 | lncRNA | upstream | 419145 | 13860288 ~ 13862472 (-) | False | G85012 |
| AMCG00021268 | mRNA | downstream | 27819 | 13407362 ~ 13410923 (-) | True | AMCG00021268 |
| AMCG00021261 | mRNA | downstream | 246734 | 13186445 ~ 13192008 (-) | True | AMCG00021261 |
| AMCG00021258 | mRNA | downstream | 348087 | 13044461 ~ 13090655 (-) | True | AMCG00021258 |
| AMCG00021260 | mRNA | downstream | 522617 | 12910567 ~ 12916125 (-) | True | AMCG00021260 |
| AMCG00021259 | mRNA | downstream | 649408 | 12767621 ~ 12789334 (-) | False | AMCG00021259 |
| AMCG00021270 | mRNA | upstream | 14100 | 13455243 ~ 13488741 (-) | True | AMCG00021270 |
| AMCG00021272 | mRNA | upstream | 104487 | 13545630 ~ 13555697 (-) | True | AMCG00021272 |
| AMCG00021269 | mRNA | upstream | 116013 | 13557156 ~ 13561413 (-) | True | AMCG00021269 |
| AMCG00021273 | mRNA | upstream | 125215 | 13566358 ~ 13567828 (-) | True | AMCG00021273 |
| AMCG00021271 | mRNA | upstream | 134605 | 13575748 ~ 13580652 (-) | True | AMCG00021271 |
| TU105842 | other | downstream | 637156 | 12719864 ~ 12801586 (-) | True | AMCG00021259 |
| TU105805 | other | downstream | 911048 | 12527093 ~ 12527694 (-) | True | G84814 |
| TU104623 | other | downstream | 6892165 | 6544492 ~ 6546577 (-) | True | G83864 |
| TU104502 | other | downstream | 8687507 | 4748781 ~ 4751235 (-) | False | G83761 |
| TU104173 | other | downstream | 10756980 | 2681560 ~ 2681762 (-) | False | AMCG00021090 |
| TU105989 | other | upstream | 186192 | 13627335 ~ 13627747 (-) | True | G84952 |
| TU106093 | other | upstream | 428796 | 13869939 ~ 13917868 (-) | True | G85037 |
| TU106219 | other | upstream | 608831 | 14049974 ~ 14051897 (-) | True | G85115 |
| TU106928 | other | upstream | 2799861 | 16241004 ~ 16242655 (-) | False | AMCG00021387 |
| TU107075 | other | upstream | 3205996 | 16647139 ~ 16649825 (-) | False | AMCG00021412 |
