Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00072820 |
| length | 786 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.48 |
| exon number | 5 |
| gene id | XLOC_036994 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 12444494 ~ 12455521 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050522-53 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM41A (transmembrane protein 41A). |
| ensembl_id | ENSDART00000146868 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072807 | lncRNA | upstream | 1506050 | 10936773 ~ 10938469 (+) | True | XLOC_036987 |
| TCONS_00075072 | lncRNA | upstream | 1684406 | 10737086 ~ 10760113 (+) | True | XLOC_036985 |
| TCONS_00074886 | lncRNA | upstream | 1879573 | 10562638 ~ 10564946 (+) | True | XLOC_036982 |
| TCONS_00075071 | lncRNA | upstream | 2286972 | 10155978 ~ 10157547 (+) | True | XLOC_036979 |
| TCONS_00072798 | lncRNA | upstream | 2509453 | 9934310 ~ 9935066 (+) | True | XLOC_036977 |
| TCONS_00075073 | lncRNA | downstream | 6861 | 12461619 ~ 12469043 (+) | True | XLOC_036995 |
| TCONS_00072832 | lncRNA | downstream | 488521 | 12943279 ~ 12943755 (+) | False | XLOC_037000 |
| TCONS_00072835 | lncRNA | downstream | 622094 | 13076852 ~ 13089863 (+) | True | XLOC_037001 |
| TCONS_00072841 | lncRNA | downstream | 778817 | 13233575 ~ 13234144 (+) | False | XLOC_037003 |
| TCONS_00072842 | lncRNA | downstream | 780262 | 13235020 ~ 13239029 (+) | False | XLOC_037003 |
| TCONS_00072818 | mRNA | upstream | 848783 | 11587660 ~ 11595736 (+) | True | XLOC_036993 |
| TCONS_00072817 | mRNA | upstream | 848875 | 11587629 ~ 11595644 (+) | False | XLOC_036993 |
| TCONS_00072816 | mRNA | upstream | 909897 | 11532025 ~ 11534622 (+) | True | XLOC_036992 |
| TCONS_00072814 | mRNA | upstream | 1034828 | 11379859 ~ 11409691 (+) | True | XLOC_036990 |
| TCONS_00072813 | mRNA | upstream | 1058049 | 11379782 ~ 11386470 (+) | False | XLOC_036990 |
| TCONS_00072823 | mRNA | downstream | 392282 | 12847040 ~ 12869049 (+) | False | XLOC_036997 |
| TCONS_00072824 | mRNA | downstream | 392352 | 12847110 ~ 12866000 (+) | True | XLOC_036997 |
| TCONS_00072825 | mRNA | downstream | 432733 | 12887491 ~ 12894091 (+) | False | XLOC_036998 |
| TCONS_00072826 | mRNA | downstream | 435403 | 12890161 ~ 12893808 (+) | True | XLOC_036998 |
| TCONS_00072827 | mRNA | downstream | 439820 | 12894578 ~ 12903567 (+) | False | XLOC_036999 |
| TCONS_00072815 | other | upstream | 996610 | 11447777 ~ 11447909 (+) | True | XLOC_036991 |
| TCONS_00072801 | other | upstream | 2100539 | 10343864 ~ 10343980 (+) | True | XLOC_036980 |
| TCONS_00072788 | other | upstream | 3052288 | 9371502 ~ 9392231 (+) | True | XLOC_036971 |
| TCONS_00072789 | other | upstream | 3066541 | 9377863 ~ 9377978 (+) | True | XLOC_036972 |
| TCONS_00072785 | other | upstream | 3325272 | 9118553 ~ 9119247 (+) | True | XLOC_036969 |
| TCONS_00072822 | other | downstream | 373247 | 12828005 ~ 12828120 (+) | True | XLOC_036996 |
| TCONS_00072843 | other | downstream | 784059 | 13238817 ~ 13246526 (+) | True | XLOC_037003 |
| TCONS_00072844 | other | downstream | 993771 | 13448529 ~ 13448648 (+) | True | XLOC_037004 |
| TCONS_00072854 | other | downstream | 1259653 | 13714411 ~ 13728936 (+) | True | XLOC_037008 |
| TCONS_00072861 | other | downstream | 1310499 | 13765257 ~ 13786953 (+) | True | XLOC_037009 |
