Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00072828 |
| length | 645 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 5 |
| gene id | XLOC_036999 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 12894578 ~ 12903567 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004222 | metalloendopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008237 | metallopeptidase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070912-147 | Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. |
| ensembl_id | ENSDART00000136417 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075073 | lncRNA | upstream | 427297 | 12461619 ~ 12469043 (+) | True | XLOC_036995 |
| TCONS_00072807 | lncRNA | upstream | 1957871 | 10936773 ~ 10938469 (+) | True | XLOC_036987 |
| TCONS_00075072 | lncRNA | upstream | 2136227 | 10737086 ~ 10760113 (+) | True | XLOC_036985 |
| TCONS_00074886 | lncRNA | upstream | 2331394 | 10562638 ~ 10564946 (+) | True | XLOC_036982 |
| TCONS_00075071 | lncRNA | upstream | 2738793 | 10155978 ~ 10157547 (+) | True | XLOC_036979 |
| TCONS_00072832 | lncRNA | downstream | 42316 | 12943279 ~ 12943755 (+) | False | XLOC_037000 |
| TCONS_00072835 | lncRNA | downstream | 175889 | 13076852 ~ 13089863 (+) | True | XLOC_037001 |
| TCONS_00072841 | lncRNA | downstream | 332612 | 13233575 ~ 13234144 (+) | False | XLOC_037003 |
| TCONS_00072842 | lncRNA | downstream | 334057 | 13235020 ~ 13239029 (+) | False | XLOC_037003 |
| TCONS_00075074 | lncRNA | downstream | 568111 | 13469074 ~ 13471527 (+) | True | XLOC_037005 |
| TCONS_00072825 | mRNA | upstream | 2249 | 12887491 ~ 12894091 (+) | False | XLOC_036998 |
| TCONS_00072826 | mRNA | upstream | 2532 | 12890161 ~ 12893808 (+) | True | XLOC_036998 |
| TCONS_00072823 | mRNA | upstream | 27291 | 12847040 ~ 12869049 (+) | False | XLOC_036997 |
| TCONS_00072824 | mRNA | upstream | 30340 | 12847110 ~ 12866000 (+) | True | XLOC_036997 |
| TCONS_00072819 | mRNA | upstream | 440819 | 12444494 ~ 12455521 (+) | False | XLOC_036994 |
| TCONS_00072829 | mRNA | downstream | 4628 | 12905591 ~ 12915657 (+) | False | XLOC_037000 |
| TCONS_00072830 | mRNA | downstream | 6611 | 12907574 ~ 12953824 (+) | False | XLOC_037000 |
| TCONS_00072831 | mRNA | downstream | 33573 | 12934536 ~ 12944019 (+) | False | XLOC_037000 |
| TCONS_00072833 | mRNA | downstream | 47548 | 12948511 ~ 12951339 (+) | True | XLOC_037000 |
| TCONS_00072834 | mRNA | downstream | 58797 | 12959760 ~ 13111163 (+) | False | XLOC_037001 |
| TCONS_00072822 | other | upstream | 68220 | 12828005 ~ 12828120 (+) | True | XLOC_036996 |
| TCONS_00072821 | other | upstream | 441397 | 12444524 ~ 12454943 (+) | True | XLOC_036994 |
| TCONS_00072820 | other | upstream | 441582 | 12444519 ~ 12454758 (+) | False | XLOC_036994 |
| TCONS_00072815 | other | upstream | 1448431 | 11447777 ~ 11447909 (+) | True | XLOC_036991 |
| TCONS_00072801 | other | upstream | 2552360 | 10343864 ~ 10343980 (+) | True | XLOC_036980 |
| TCONS_00072843 | other | downstream | 337854 | 13238817 ~ 13246526 (+) | True | XLOC_037003 |
| TCONS_00072844 | other | downstream | 547566 | 13448529 ~ 13448648 (+) | True | XLOC_037004 |
| TCONS_00072854 | other | downstream | 813448 | 13714411 ~ 13728936 (+) | True | XLOC_037008 |
| TCONS_00072861 | other | downstream | 864294 | 13765257 ~ 13786953 (+) | True | XLOC_037009 |
| TCONS_00072865 | other | downstream | 1098840 | 13999803 ~ 14003253 (+) | True | XLOC_037011 |
