RNA id: TU163153



Basic Information


Item Value
RNA id TU163153
length 306
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G130152
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 22582316 ~ 22582621 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtcagtctggcgctcaagtggcgatctcCACCTGTCTacagtttttcatgtgcttgaaaaacacacgcattgtacagcattacaggtgttttcttacaactgtagtcagattgagtggatacagtgattacccgcaaatagaCATGGATTGGAAagggagattgaagagagctcgttttggacatgccgtgtatatgaaccttactgattcaggggcatcagtgatactgggaatggcagatcattcgtgggtttgtgccagtgctatgaaaacattgcgagtgatacaccaggtccaaatggcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163149 lncRNA upstream 81524 22500035 ~ 22500792 (+) False AMCG00001278
TU163121 lncRNA upstream 255438 22326640 ~ 22326878 (+) True G130125
TU163093 lncRNA upstream 351794 22229414 ~ 22230522 (+) False AMCG00001269
TU163085 lncRNA upstream 377191 22202030 ~ 22205125 (+) True G130090
TU163009 lncRNA upstream 602519 21978053 ~ 21979797 (+) False AMCG00001260
TU163154 lncRNA downstream 77 22582698 ~ 22582964 (+) True G130153
TU163145 lncRNA downstream 32663 22615284 ~ 22616157 (+) True G130144
TU163165 lncRNA downstream 42337 22624958 ~ 22625203 (+) True G130160
TU163171 lncRNA downstream 216476 22799097 ~ 22805058 (+) True G130166
TU163374 lncRNA downstream 632316 23214937 ~ 23217500 (+) True G130346
AMCG00001275 mRNA upstream 16696 22551140 ~ 22565620 (+) True AMCG00001275
AMCG00001277 mRNA upstream 40063 22540350 ~ 22542253 (+) True AMCG00001277
AMCG00001278 mRNA upstream 51480 22500165 ~ 22530836 (+) True AMCG00001278
AMCG00001272 mRNA upstream 131426 22384720 ~ 22450890 (+) True AMCG00001272
AMCG00001271 mRNA upstream 261143 22302530 ~ 22321173 (+) True AMCG00001271
AMCG00001276 mRNA downstream 1406 22584027 ~ 22607255 (+) True AMCG00001276
AMCG00001279 mRNA downstream 63492 22646113 ~ 22752856 (+) True AMCG00001279
AMCG00001284 mRNA downstream 448683 23031304 ~ 23033499 (+) True AMCG00001284
AMCG00001285 mRNA downstream 518286 23100907 ~ 23119955 (+) True AMCG00001285
AMCG00001292 mRNA downstream 982530 23565151 ~ 23685121 (+) False AMCG00001292
TU162879 other upstream 1305437 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 1503446 21077135 ~ 21078870 (+) True G129877
TU162800 other upstream 1639919 20942072 ~ 20942397 (+) True G129843
TU162792 other upstream 1657076 20918558 ~ 20925240 (+) True AMCG00001241
TU162705 other upstream 1905459 20611272 ~ 20676857 (+) True AMCG00001236
TU163362 other downstream 583642 23166263 ~ 23166656 (+) True G130335
TU163702 other downstream 1851172 24433793 ~ 24454385 (+) True G130616
TU163730 other downstream 2001558 24584179 ~ 24591475 (+) False AMCG00001315
TU164194 other downstream 4273978 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 4369287 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile