RNA id: AMCG00021281



Basic Information


Item Value
RNA id AMCG00021281
length 219
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00021281
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13848232 ~ 13850457 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATCGAACAGAAATGGTGCAGGTTTTTCCCCGGAGAGAGAAGGAATTTCTGGAGACAATGGCCCATGGCATCCACAGAACAGGGCAAGGAGATGGAGGAAGGGGGCAATGTCAGGAAGCTGGTGCAGCAAAGCCCGGTGAGGAACCACAGGACGAGCAGCTGGAAGAGAAGACGCCCCCGACCCCGCCTCTCTCACAAGGGGCCCATGCCATTCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106002 lncRNA upstream 162987 13680937 ~ 13685245 (+) True G84962
TU105971 lncRNA upstream 244073 13603858 ~ 13604159 (+) True G84938
TU105969 lncRNA upstream 246304 13600205 ~ 13601928 (+) True G84936
TU105947 lncRNA upstream 275785 13571771 ~ 13572447 (+) True G84923
TU105892 lncRNA upstream 410824 13435307 ~ 13437408 (+) True AMCG00021267
TU106054 lncRNA downstream 11213 13861670 ~ 13862498 (+) True G85006
TU106064 lncRNA downstream 19105 13869562 ~ 13917871 (+) True G85013
TU106071 lncRNA downstream 46462 13896919 ~ 13899981 (+) True G85019
TU106122 lncRNA downstream 112652 13963109 ~ 13964224 (+) True G85056
TU106138 lncRNA downstream 150139 14000596 ~ 14002419 (+) True G85069
AMCG00021280 mRNA upstream 96083 13731696 ~ 13752149 (+) True AMCG00021280
AMCG00021279 mRNA upstream 144142 13693368 ~ 13704090 (+) True AMCG00021279
AMCG00021275 mRNA upstream 185763 13650263 ~ 13662469 (+) True AMCG00021275
AMCG00021276 mRNA upstream 217762 13622849 ~ 13630470 (+) True AMCG00021276
AMCG00021277 mRNA upstream 249217 13586894 ~ 13599015 (+) True AMCG00021277
AMCG00021282 mRNA downstream 91530 13941987 ~ 13947771 (+) True AMCG00021282
AMCG00021283 mRNA downstream 98025 13948482 ~ 13982728 (+) True AMCG00021283
AMCG00021297 mRNA downstream 136667 13987124 ~ 13996608 (+) True AMCG00021297
AMCG00021296 mRNA downstream 165676 14016133 ~ 14033557 (+) True AMCG00021296
AMCG00021294 mRNA downstream 190983 14041440 ~ 14047801 (+) True AMCG00021294
TU105723 other upstream 1747525 12075345 ~ 12100707 (+) True G84749
TU105614 other upstream 2861058 10963148 ~ 10987174 (+) True G84657
TU105325 other upstream 4424813 9416267 ~ 9423419 (+) True G84425
TU105166 other upstream 5214822 8631727 ~ 8633410 (+) True G84301
TU104814 other upstream 6726995 7115381 ~ 7121237 (+) False AMCG00021150
TU106850 other downstream 2213143 16063600 ~ 16073618 (+) False AMCG00021373
TU107049 other downstream 2739724 16590181 ~ 16592973 (+) True G85764
TU107079 other downstream 2806187 16656644 ~ 16661882 (+) True G85787
TU107080 other downstream 2806187 16656644 ~ 16714038 (+) False G85787
TU107177 other downstream 3147420 16997877 ~ 17004131 (+) True G85869

Expression Profile