GENE ID: ENSDARG00000034307

Symbol Location Gene type Genome version Species
chrne 5: 38440099 ~ 38451082 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000034307 (chrne), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 12)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 17)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 15)
    Skeletal muscle cells (cluster: 19)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Muscle cells (cluster: 16)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Skeletal muscle cells (cluster: 38)
    		 potential marker
    		 NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-

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