Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
cplx4a | 21: 10739846 ~ 10749542 (+) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish |
Pineal gland (cluster: 23) |
potential marker |
NA |
|
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment |
Retina (cluster: 10) |
potential marker |
NA |
|
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development |
Neuron (cluster: 11) Neuron (cluster: 7) |
potential marker potential marker |
NA NA |
|
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment |
Retina (cluster: 11) |
potential marker |
NA |
|
GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
Blue cone opsin (cluster: 1) |
potential marker |
NA |
|
GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment |
Photoreceptor cells (cluster: 8) |
potential marker |
NA |
|
PRJNA672101 (WT) | retina | baseline | 5mpf, three retinas from WT zebrafsih |
Cone (cluster: 4) |
potential marker |
NA |
|
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | ||||
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | ||||
GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
PRJNA610520 (4.5dpf) | caudal hematopoietic tissue | baseline | 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. | ||||
PRJNA734348 (shield, dnmt1) | embryo | growth | 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) | ||||
GSE106587 (MZoep mutant) | embryo | baseline | 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo | ||||
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | ||||
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | ||||
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | ||||
GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum | ||||
GSE158142 (14hpf) | head | baseline | 14hpf, 10 somites, untreatment | ||||
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | ||||
GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment | ||||
GSE158142 (18hpf) | head | baseline | 18hpf, 18 somites, untreatment | ||||
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment | ||||
GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | ||||
GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | ||||
GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | ||||
GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | ||||
GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | ||||
GSE150498 (wildtype, 2X DSS+BZA) | intestine | disease | 6dpf, wildtype, 2X DSS+BZA | ||||
GSE150498 (nod2-|-, untreated) | intestine | disease | 6dpf, nod2-/-, untreated | ||||
PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS | ||||
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | ||||
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | ||||
GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | ||||
GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | ||||
PRJNA415636 (primary pancreatic islet) | primary pancreatic islet | baseline | adult, Zebrabow M, primary pancreatic islet | ||||
GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment | ||||
GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
PRJNA672101 (nrl-KO) | retina | growth | 5mpf, three retinas from nrl-KO zebrafsih | ||||
PRJNA551501 (2mpf) | thyroid gland | baseline | 2mpf, Tg(tg:mVenus-T2A-NTR) | ||||
PRJNA551501 (8mpf) | thyroid gland | baseline | 8mpf, Tg(tg:mVenus-T2A-NTR) | ||||
GSE163907 (24hpf) | trunk | baseline | 24hpf, trunk tg(sox10:GFP) positive cells | ||||
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | ||||
PRJNA641144 (C_PRO) | tumor | disease | adult, ZMEL1-PRO cells in vitro co-culture | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | ||||
GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | ||||
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- |