GENE ID: --

Symbol Location Gene type Genome version Species
lsp1 -- -- -- Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Epidermal cells (cluster: 1)
 potential marker
 NA
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Somites (cluster: 3)
 potential marker
 NA
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells More-differentiated SHFPs (cluster: 3)
 potential marker
 NA
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells More-differentiated SHFPs (cluster: 3)
 potential marker
 NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos HR ionocytes (cluster: 5)
 potential marker
 NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
 potential marker
 NA
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Mesoderm (cluster: 7)
Heart primordium (cluster: 8)
 potential marker
potential marker
 NA
NA
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
Mesoderm (cluster: 7)
 potential marker
potential marker
 NA
NA
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Pharyngeal endoderm (cluster: 10)
Mesoderm (cluster: 8)
 potential marker
potential marker
 NA
NA
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Mesoderm (cluster: 10)
Placode (cluster: 4)
 potential marker
potential marker
 NA
NA
GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 5)
 potential marker
 NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Pharyngeal arch (cluster: 2)
 potential marker
 NA
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Epithelial cells (cluster: 12)
 potential marker
 NA
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Horizontal cells (cluster: 4)
Muller glia cells (cluster: 5)
 potential marker
potential marker
 NA
NA
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Muller glia cells (cluster: 10)
 potential marker
 NA
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
GSE151354 (wild type) cartilage baseline 21dpf, wild type
GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE158142 (3dpf) head baseline 3dpf, untreatment
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-

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