G243989


Basic Information

Item Value
gene id G243989
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2596705 ~ 2682061 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU276925
GTCATTGTAAACTTTTGAGCCTTCTTCATTGAAGTGACGTGCATTGCGGAACATCAGCTTCATGTCCTCCATCATGGAGTCCTCACTGGGGTATCTGTCGGAGCGGATGTTGTGGTCTATGGTCCTCAGGTCCATTGGTTCCAGTATAATCTTGTAGTAGTCTGGGTAGTCTTTCTTTGAGGGCTTGACCATGAAGAGGTCGCAGAGTCTCCGGCCTGTCATCTCCCGAGCCTCTGCCACAGCAGCGTACAGAGCCTTCATGCGGTTTTTCTTTGTGTTCTTCTTATGGCT
>TU276926
GTCATTGTAAACTTTTGAGCCTTCTTCATTGAAGTGACGTGCATTGCGGAACATCAGCTTCATGTCCTCCATCATGGAGTCCTCACTGGGGTATCTGTCGGAGCGGATGTTGTGGTCTATGGTCCTCAGGTCCATTGGTTCCAGTATAATCTTGTAGTAGTCTGGGTAGTCTTTCTTTGAGGGCTTGACCATGAAGAGGTCGCAGAGTCTCCGGCCTGTCATCTCCCGAGCCTCTGCCACAGCAGCGTACAGAGCCTTCATGCGGTTTTTCTTTGTGTTCTTCTTATGGCTTTTGCGTTTGATGCTGCCGCCATCAGAAAGAGTGGATGAGAGCATACTGTCACCATCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276925 False 291 lncRNA 0.49 2 2596705 2681817
TU276926 True 352 lncRNA 0.49 3 2596705 2682061

Neighbor

gene id symbol gene type direction distance location
CI01000057_02548444_02558549 NA coding upstream 37013 2547895 ~ 2559692 (+)
CI01000057_02416295_02420310 CDA coding upstream 176163 2416295 ~ 2420542 (+)
CI01000057_02412538_02415631 NA coding upstream 180772 2411516 ~ 2415933 (+)
CI01000057_02395285_02396439 NA coding upstream 200144 2394598 ~ 2396561 (+)
CI01000057_02347155_02370642 PUSL1 coding upstream 226041 2347155 ~ 2370664 (+)
CI01000057_02693930_02700711 GNL3 coding downstream 11869 2693930 ~ 2700711 (+)
CI01000057_02707814_02708251 NA coding downstream 25753 2707814 ~ 2708374 (+)
CI01000057_02758170_02782493 CAMK1A, CAMK1.L, CAMK1B, CAMK1 coding downstream 76109 2758170 ~ 2782566 (+)
CI01000057_02794112_02799150 NA coding downstream 111930 2793991 ~ 2799153 (+)
CI01000057_02884788_02888727 NA coding downstream 202020 2884081 ~ 2888805 (+)
G243986 NA non-coding upstream 4334 2592133 ~ 2592371 (+)
G243985 NA non-coding upstream 4936 2591498 ~ 2591769 (+)
G243973 NA non-coding upstream 25907 2570555 ~ 2570798 (+)
G243933 NA non-coding upstream 94796 2501533 ~ 2501909 (+)
G243874 NA non-coding upstream 141588 2438184 ~ 2455117 (+)
G243999 NA non-coding downstream 22856 2704917 ~ 2705443 (+)
G244042 NA non-coding downstream 26504 2708565 ~ 2708955 (+)
G244043 NA non-coding downstream 28512 2710573 ~ 2710781 (+)
G244044 NA non-coding downstream 30993 2713054 ~ 2713474 (+)
G244045 NA non-coding downstream 31935 2713996 ~ 2714198 (+)
G243975 NA other upstream 19853 2576453 ~ 2576852 (+)
G243558 NA other upstream 1638334 956063 ~ 958371 (+)
G243557 NA other upstream 1641510 954843 ~ 955195 (+)
CI01000057_00417827_00418207 NA other upstream 2176195 417700 ~ 418655 (+)
G245231 NA other downstream 405035 3087096 ~ 3292562 (+)
G245401 NA other downstream 855508 3537569 ~ 3538442 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 1159967 3842028 ~ 3844691 (+)
G245486 NA other downstream 1527836 4209897 ~ 4212081 (+)
G245725 NA other downstream 2416624 5098685 ~ 5103606 (+)

Expression


Co-expression Network