G244012


Basic Information

Item Value
gene id G244012
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2761583 ~ 2772925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU276953
AGTACCAACTACTAGATTTTTGGTATAGTGACATCCCTATTTGTTACTAAAAAGCAAATAAAAGTATTATAGTATACGTTTTAATAAAGTTAAAATGTTTTAAAAAGCTATAAAAGGCTAAAATATTCCATGTTTGACTAAATTATTAAAAGAGTTTCCTTTCTATTGTGGTCAAGGTTTATAGGGATTTTAAGAAGTAATTAGTAAGTTACTTATTGAGTAATTAAATTACTTTTCAGACAGTGTAATTAGAAAAGTATTTTAAATACAACATTGATGATATAATTAGTAATTAGTAATTAATTACTTTTTTGAAATAACTTACCTAACACTGCTTGCAGGTAAAGAAATGTGCTATAAATACACCATGGCTTCTGCATTTTAGAAGGTAATTGTGACTGCCATCATTCTGGAATCTCTAGGGCATTTATGATTCAACCGCACAGACCGGATCTGCTCAGATCTTCTGTCAGAGGGCCAAACCAGACAACAACTAGTCTGGATTTGCCAAAGGTAGAGAAGTTCACAGTGTGGAATCTTTGAAAATTATTTTGAGTTTAGTGTGAAGCTGTTTGGATATACTAAACAATAGTTTCTCTGCAACTCTTTATTTACTTTAACCCTATAGAAAATAGGTTAATTAATGTATGTAATTACACTGTAACACAAAAACACCTATACTCATATTTATTTCATATTATAGAGCATTTCACTGAGGCAGAAAACTACTCTTATTTTCATTGTAGTACACAGTATGCATATTTCTTGCAGACATAAAATACCATAAATGGCCTGTACAACAGAGTACACTGCAAAGAATTCTGGATTCTGCTTGGCTGCCAATGTTTTTATTGTTCATCGGCTGGAAAAAAACCTTTTGTTATGAAAGTGATCCCAATGATATTGTTTCTCTGTGGCGTTATTGTTATAGTTGTGGTGTGGACTCTGCTATTCTTTTACATTTAGAATGATTTTTATAACTAAATCTTTATCATTATTATTATTATAATGATAATGATAATTAACATCATTGTGTGAATGGGACTTAAGACATTATCACACAAAATAAAAACACTAAATAATTTGATTTCCAAGATGATAACTGGATGCCACTCGCATGCATTCGAGAAAAATTAAATCAGATCATCCAGCATTAATTGAAAATACAACAGTTGAAATGATTTTATCTTTAATTTAATTTAGTTTTTGTTGTATTTTAGCGAACATTTATACTAATGTTTTTATTTTATATTAGTTAAANNNNTAGTTCACCCAAAAATGAAAATAATGTCATTTATTACTCACCCTCATGCCGTTCCACACCCGTAAGACCTTCGTTAATCTTNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276953 True 1347 lncRNA 0.30 2 2761583 2772925

Neighbor

gene id symbol gene type direction distance location
CI01000057_02707814_02708251 NA coding upstream 53209 2707814 ~ 2708374 (+)
CI01000057_02693930_02700711 GNL3 coding upstream 60872 2693930 ~ 2700711 (+)
CI01000057_02618561_02619733 GATA2A, GATA2 coding upstream 141812 2618420 ~ 2619771 (+)
CI01000057_02548444_02558549 NA coding upstream 201891 2547895 ~ 2559692 (+)
CI01000057_02416295_02420310 CDA coding upstream 341041 2416295 ~ 2420542 (+)
CI01000057_02794112_02799150 NA coding downstream 21066 2793991 ~ 2799153 (+)
CI01000057_02884788_02888727 NA coding downstream 111156 2884081 ~ 2888805 (+)
CI01000057_03326630_03330891 NA coding downstream 551794 3324719 ~ 3331089 (+)
CI01000057_03496993_03600733 PTPRG, PTPRGA coding downstream 724068 3496993 ~ 3600733 (+)
CI01000057_03611693_03627832 CSE1L coding downstream 838768 3611693 ~ 3628414 (+)
G244010 NA non-coding upstream 18376 2738357 ~ 2743207 (+)
G244001 NA non-coding upstream 41412 2719924 ~ 2720171 (+)
G244000 NA non-coding upstream 42792 2718541 ~ 2718791 (+)
G244047 NA non-coding upstream 45322 2715459 ~ 2716261 (+)
G244046 NA non-coding upstream 46969 2714326 ~ 2714614 (+)
G244061 NA non-coding downstream 45385 2818310 ~ 2819171 (+)
G244068 NA non-coding downstream 58425 2831350 ~ 2833300 (+)
G244069 NA non-coding downstream 62883 2835808 ~ 2836052 (+)
G244070 NA non-coding downstream 63155 2836080 ~ 2836349 (+)
G245103 NA non-coding downstream 103560 2876485 ~ 2876724 (+)
G243991 NA other upstream 109023 2635237 ~ 2652560 (+)
G243975 NA other upstream 184731 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 365101 2394598 ~ 2396561 (+)
G243558 NA other upstream 1803212 956063 ~ 958371 (+)
G243557 NA other upstream 1806388 954843 ~ 955195 (+)
G245231 NA other downstream 314171 3087096 ~ 3292562 (+)
G245401 NA other downstream 764644 3537569 ~ 3538442 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 1069103 3842028 ~ 3844691 (+)
G245486 NA other downstream 1436972 4209897 ~ 4212081 (+)
G245725 NA other downstream 2325760 5098685 ~ 5103606 (+)

Expression


Co-expression Network