G244061


Basic Information

Item Value
gene id G244061
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2818310 ~ 2819171 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU277006
TTTTTAGATCCATCTTTTCACACTGAGGACAACTGAGGGACTCAAACACAACTATTAAAAAGGGTTCAAATATGCAAATGATGGTGGAAAACTGAAGAATTTTTGGGACCTGGAGATTTTTTCTAAAGAACAGAGCTCAGTTTAACTGCTCAGAACAAACAAGAGACTCATGAACAACCATCACACAACAAACAAACAGTCGTAGATCATCCAGGTAACCACACACAGTATTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277006 True 235 lncRNA 0.37 2 2818310 2819171

Neighbor

gene id symbol gene type direction distance location
CI01000057_02794112_02799150 NA coding upstream 19157 2793991 ~ 2799153 (+)
CI01000057_02758170_02782493 CAMK1A, CAMK1.L, CAMK1B, CAMK1 coding upstream 35744 2758170 ~ 2782566 (+)
CI01000057_02707814_02708251 NA coding upstream 109936 2707814 ~ 2708374 (+)
CI01000057_02693930_02700711 GNL3 coding upstream 117599 2693930 ~ 2700711 (+)
CI01000057_02618561_02619733 GATA2A, GATA2 coding upstream 198539 2618420 ~ 2619771 (+)
CI01000057_02884788_02888727 NA coding downstream 64910 2884081 ~ 2888805 (+)
CI01000057_03326630_03330891 NA coding downstream 505548 3324719 ~ 3331089 (+)
CI01000057_03496993_03600733 PTPRG, PTPRGA coding downstream 677822 3496993 ~ 3600733 (+)
CI01000057_03611693_03627832 CSE1L coding downstream 792522 3611693 ~ 3628414 (+)
CI01000057_03636623_03639946 NA coding downstream 817452 3636623 ~ 3640129 (+)
G244012 NA non-coding upstream 45385 2761583 ~ 2772925 (+)
G244010 NA non-coding upstream 75103 2738357 ~ 2743207 (+)
G244001 NA non-coding upstream 98139 2719924 ~ 2720171 (+)
G244000 NA non-coding upstream 99519 2718541 ~ 2718791 (+)
G244047 NA non-coding upstream 102049 2715459 ~ 2716261 (+)
G244068 NA non-coding downstream 12179 2831350 ~ 2833300 (+)
G244069 NA non-coding downstream 16637 2835808 ~ 2836052 (+)
G244070 NA non-coding downstream 16909 2836080 ~ 2836349 (+)
G245103 NA non-coding downstream 57314 2876485 ~ 2876724 (+)
G245107 NA non-coding downstream 64303 2883474 ~ 2883712 (+)
G243991 NA other upstream 165750 2635237 ~ 2652560 (+)
G243975 NA other upstream 241458 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 421828 2394598 ~ 2396561 (+)
G243558 NA other upstream 1859939 956063 ~ 958371 (+)
G243557 NA other upstream 1863115 954843 ~ 955195 (+)
G245231 NA other downstream 267925 3087096 ~ 3292562 (+)
G245401 NA other downstream 718398 3537569 ~ 3538442 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 1022857 3842028 ~ 3844691 (+)
G245486 NA other downstream 1390726 4209897 ~ 4212081 (+)
G245725 NA other downstream 2279514 5098685 ~ 5103606 (+)

Expression


Co-expression Network