Gene
RNA
| Item | Value |
|---|---|
| gene id | G245519 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 4060202 ~ 4060588 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278697 | True | 387 | lncRNA | 0.44 | 1 | 4060202 | 4060588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04029208_04038844 | SLC1A6 | coding | upstream | 21292 | 4029208 ~ 4038910 (+) |
| CI01000057_04008460_04012934 | TAX1BP3.S, TAX1BP3, MGC83163 | coding | upstream | 47227 | 4008190 ~ 4012975 (+) |
| CI01000057_03999611_04005699 | NR2F6, NR2F6A, NR2F6B | coding | upstream | 53100 | 3999611 ~ 4007102 (+) |
| CI01000057_03973241_03985010 | USHBP1 | coding | upstream | 75145 | 3973241 ~ 3985057 (+) |
| CI01000057_03943917_03961522 | GTPBP3 | coding | upstream | 98665 | 3943917 ~ 3961537 (+) |
| CI01000057_04088057_04092278 | CTNS | coding | downstream | 27469 | 4088057 ~ 4092278 (+) |
| CI01000057_04105710_04123101 | RANBP3A, RANBP3 | coding | downstream | 45122 | 4105710 ~ 4123718 (+) |
| CI01000057_04202045_04205390 | VMAC | coding | downstream | 141184 | 4201772 ~ 4205479 (+) |
| CI01000057_04218508_04219283 | GA45B, GADD45B, GADD45BA | coding | downstream | 157746 | 4218334 ~ 4219894 (+) |
| CI01000057_04357565_04358136 | NA | coding | downstream | 296977 | 4357565 ~ 4359044 (+) |
| G245513 | NA | non-coding | upstream | 18713 | 4041187 ~ 4041489 (+) |
| G245493 | NA | non-coding | upstream | 90133 | 3969790 ~ 3970069 (+) |
| G245444 | NA | non-coding | upstream | 133897 | 3919805 ~ 3926305 (+) |
| G245441 | NA | non-coding | upstream | 141605 | 3911591 ~ 3918597 (+) |
| G245359 | NA | non-coding | upstream | 152600 | 3899520 ~ 3907602 (+) |
| G245526 | NA | non-coding | downstream | 80563 | 4141151 ~ 4142227 (+) |
| G245539 | NA | non-coding | downstream | 95209 | 4155797 ~ 4161350 (+) |
| G245550 | NA | non-coding | downstream | 139650 | 4200238 ~ 4200458 (+) |
| G245473 | NA | non-coding | downstream | 147351 | 4207939 ~ 4208938 (+) |
| G245562 | NA | non-coding | downstream | 170861 | 4231449 ~ 4231683 (+) |
| CI01000057_03842028_03844033 | NDUFS7.S, MGC85267, NDUFS7 | other | upstream | 215511 | 3842028 ~ 3844691 (+) |
| G245401 | NA | other | upstream | 521760 | 3537569 ~ 3538442 (+) |
| G245231 | NA | other | upstream | 767640 | 3087096 ~ 3292562 (+) |
| G243991 | NA | other | upstream | 1407642 | 2635237 ~ 2652560 (+) |
| G243975 | NA | other | upstream | 1483350 | 2576453 ~ 2576852 (+) |
| G245486 | NA | other | downstream | 149309 | 4209897 ~ 4212081 (+) |
| G245725 | NA | other | downstream | 1038097 | 5098685 ~ 5103606 (+) |
| CI01000057_05564489_05579041 | NA | other | downstream | 1513316 | 5564489 ~ 5579843 (+) |
| G245856 | NA | other | downstream | 1577066 | 5637654 ~ 5643340 (+) |
| G245857 | NA | other | downstream | 1594688 | 5655276 ~ 5657239 (+) |
