XLOC_015967 (cib3)


Basic Information

Item Value
gene id XLOC_015967
gene name cib3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 55249838 ~ 55266971 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031642
atgttttttattttttttGATTGCACATATTTCACCAGGAAAGAAATACTGAGGCTGTTTCATCGGTACCGTGATTTGGCTCCTCAGCTGGTGCCGCTGGACTACACCAATGAGCCGGACGTGCGTTTGCCGTATGAGCTGATTGGCAGCATGCCGGAGCTGAAGGATAACCCATTCAGACAGAGGATCGCGGAGGTTTTCTCTGAGGATGGGCAGGGAAACATGACTCTGGACGACTTTCTGGACATGTTTTCAGTGATGAGTGAAATGGCGCCGCGGGACCTGAAGGCATATTACGCCTTTAAGATATACGACTTCAACAATGACGACTTCATCTGTAAATCAGACCTGGAGAAAACTCTGAATAAACTGACCCGAAATGAGCTCACAGAGGACGAGGTGCGGATGGTGTGCGAGAAGGTGATTGATGAGGCTGATCTTGACAATGATGGCCGCCTTTCTCTGGAGGATTTCCAGCACATGATTTTGAGAGCGCCTGATTTCCTCAGatatgttttgaaaaattgttataacttttcttga

Function

symbol description
cib3 Predicted to enable calcium ion binding activity. Orthologous to human CIB3 (calcium and integrin binding family member 3).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-121121-1 Predicted to enable calcium ion binding activity. Orthologous to human CIB3 (calcium and integrin binding family member 3).

Ensembl:

ensembl_id ENSDARG00000091072

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031642 True 543 mRNA 0.46 6 55249838 55266971

Neighbor

gene id symbol gene type direction distance location
XLOC_015966 zmp:0000000521 coding upstream 24810 55199721 ~ 55225028 (+)
XLOC_015965 rnf126 coding upstream 269688 54844755 ~ 54980150 (+)
XLOC_015964 twsg1a coding upstream 415074 54798689 ~ 54834764 (+)
XLOC_015963 ankrd12 coding upstream 463090 54696042 ~ 54786748 (+)
XLOC_015962 ndufv2 coding upstream 559654 54641644 ~ 54690184 (+)
XLOC_015968 NA coding downstream 1049 55268020 ~ 55269290 (+)
XLOC_015969 LPL coding downstream 98756 55365727 ~ 55390332 (+)
XLOC_015970 ap1m1 coding downstream 163017 55429988 ~ 55492315 (+)
XLOC_015971 NA coding downstream 336157 55603128 ~ 55603565 (+)
XLOC_015972 klf2b coding downstream 398124 55665095 ~ 55673225 (+)
XLOC_015960 CABZ01050280.1 non-coding upstream 802125 54430632 ~ 54447713 (+)
XLOC_015959 NA non-coding upstream 821900 54425088 ~ 54427938 (+)
XLOC_015956 CU179656.2 non-coding upstream 935629 54305610 ~ 54314209 (+)
XLOC_015955 NA non-coding upstream 979472 54085893 ~ 54270366 (+)
XLOC_015954 NA non-coding upstream 1206047 54042778 ~ 54043791 (+)
XLOC_015973 NA non-coding downstream 510851 55777822 ~ 55780037 (+)
XLOC_015974 NA non-coding downstream 515566 55782537 ~ 55784445 (+)
XLOC_015978 NA non-coding downstream 858032 56125003 ~ 56130443 (+)

Expression


Co-expression Network