XLOC_022401 (scn8aa)


Basic Information

Item Value
gene id XLOC_022401
gene name scn8aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 27251626 ~ 27345425 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044198
CGTGATCCCAACACGACAACTAAAATTAACGCCTTTTATTGTGGAACCGGTGCTACCTATTGGCCGACACTCCCTTACATTTTGCTGGGAGTCATCAATTATGCAGGGTAACGGTGCACACTGAAGGAAGGTAGCAGCAACAATATGGCGACATCCGCAATTTCTTCCGAATTTATTCGACATCTGCAGTCCAGCGAGGATTTTTTGGATACCCGCTAACGCAATCATAAACTGGCTGCCGTGGAGGGTACATAACAGGAGAAGAAGTTGCTGCAGGATGAAAACATGGCTGCACCCCTTCTTGCACCGCCAGGACCTAACAGCTACAAATACTTTACCAGGGAATCACTCCGTGAAATCGAGAAGCGTATCGAGGAGGAGAAAGCCAAGCCGCCACCTAAGCCAGACAACAGCTATCGCGATGATGACGACGAGAACAAGCCCAAACCTAACGGTGACCTGGAGGCGGGCAAGAGTCTGCCCTTCATCTACGGGGACATCCCTCCTGGCATGGTGGCAACACCACTGGAGGATTTCGATCCCTTCTACATAAATCAGAAAACATTTGTAGTCCTAAATAAAGGGAAAACAATCTTCCGCTTTAGTGCCACACCTGCCTTGTACATGATAAGCCCTTTTAATCTTGCTAGACGAATAGCGATTAAAATTTTGATACATTCAGTATTCAGCATGTTCATTATGTGTACGATTTTGACCAACTGTGTGTTCATGACTTTTAGTAATCCTCCCGAGTGGTCCAAACAAGTAGAGTATACTTTCACTGGAATTTATACGTTTGAATCAGCAGTAAAAATCATTGCCCGTGGATTCTGTATAGATGGCTTCACATTCCTTAGAGATCCATGGAACTGGCTGGATTTCATGGTCATCTCAATGGCATATGTAACAGAGTTTGTGGACCTGGGGAATGTATCTGCGCTGAGAACATTCAGAGTTCTCCGAGCATTGAAAACTATCTCTGTCATTCCAGGTCTGAAGACCATTGTTGGCGCTTTGATCCAGTCTGTGAAGAAGCTGTCAGATGTGATGATCCTCACCGTGTTCTGCCTCAGTGTCTTTGCCCTCATTGGTCTGCAGCTCTTCATGGGGAATCTGCGGCAGAAGTGTGTCATCTGGCCCATCAACATCACAGAAATGTTCCCAGATGTCAATGGCAGCCGTGCATTCAACTGGGACGAGTACATCTTGAATGAAACCAATTTCTACTTCCTGCCAGACCAGTTGGATGCACTTTTGTGTGGAAACAGCTCTGATTCAGGTCGCTGTCCTGAAGGTTACACATGCATGAAGGCTGGCCGTAATCCAAACTATGGCTACACCAGCTTTGACAGTTTTGGCTGGGCTTTCCTGGCTCTCTTCCGCCTCATGACGCAGGACTTCTGGGAGAACTTGTACCAGCTGACACTGAGAGCAGCAGGGAAGACCTACATGATTTTCTTTGTGCTGGTCATCTTTGTGGGCTCCTTCTATCTTGTGAATCTGATTCTGGCTGTGGTGGCCATGGCATATGAGGAGCAGAACCAGGCCACCATGGAGGAGGCGGAGCGAAAGGAGGCGGAGTTTAAAGCCATGCTGGAACAGCTGAAGAAACAGCAGGAGGACGCACAGGCAAATGCAATGGCGACGTCAGCGGGAACAGTGTCTGAGGACGTGGTGGAGGATGATGGAGATGGAGAAGGGAATTTGTCCTGCAGCTCGTCTGAGATGTCTAAACTGAGCTCCAAGAGTGCCAAAGAGAGACGCAACCGCAAGAAGAAGTGGCGGCAGAAAGAGCAGGACAAAGAGAAAGGGGACAGCGAGAAGTTTGTCAAATCCGAATCAGACGATGGAAGCAGAAGGAGATTTCGTTTCCCTGATAACCGTTTGGGCCGAAGGAGTTCCATAATGAACCAGTCTTTGCTCAGCATCCCAGGCTCTCCATTCCCTTCGAGGCGCAACAGTAAGAGCAGCATCTTCAGCCGCTGTAAAGACGGAGGCTCTGAGAACGAGTTTGCAGATGATGAGCACAGCACGGTTGAGGAGTACGACGAGCGGCGCGACTCCTTCCTAAGCCCTCAGCGTCGCAGCAGCTACACAGGCTTCTACGGCAAGCGCAACAGCACAGTGGATTGCAATGGAGTGGTGTCTCTCATTGGGCCGGGGCCTGGCGGACGCCTTCTGCCTGAGCCGACCACTGATCTTGAAATTAAGAAGAAACTCTCAGGCTCTCTCATGGTTTCCGTAGAGCAGCTTAACACATCATTCGGGCGCAAGGAGCGAGCAAACAGCGTGATGAGTGCGTTAACCAACACATTGGTTGAAGAACTGGAAGAGTCTCAGAGGAAATGTCCACCCTGCTGGTACAAATTCGCCAACACGTTTCTTATCTGGGAGTGTGGCCCTCTATGGATGTCGATAAAGGAGATTGTGAACCTGATTGTAATGGACCCTTTTGTGGACCTGGCTATCACCATTTGCATTGTGCTGAATACTCTCTTCATGGCCATGGAGCATTACCCGATGACGCCGCAATTTGAGCATGTGCTGTCTGTCGGAAACCTGGTGTTTACTGGAATCTTCACTGCCGAAATGTTTGCCAAACTGGTTGCAATGGACCCATACTACTACTTCCAGGAGGGCTGGAATATATTTGATGGCTTTATTGTGAGCTTGAGTTTGATGGAGTTGGGCTTGGCCAATGTGGAAGGTCTTTCTGTGCTGCGATCATTCCGATTGCTGAGAGTGTTCAAGTTGGCTAAGTCATGGCCCACTCTCAACATGCTGATAAAGATCATCGGTAATTCAGTCGGAGCTTTGGGGAACCTGACCCTGGTGTTGGCCATCATTGTCTTTATCTTTGCTGTTGTCGGCATGCAGTTGTTTGGGAAGAGCTACAAGGACTGTGTGTGCAAGATCGCTCAGGATTGTGAGCTGCCCCGTTGGCACATGAACGACTTCTTTCACTCTTTCCTTATTGTCTTCCGAGTGTTATGCGGAGAGTGGATCGAAACCATGTGGGACTGTATGGAGGTGGCTGGACAGGCCATGTGTCTCATCGTATTCATGATGGTCATGGTTATCGGGAACTTGGTGGTGTTGAATCTCTTCCTTGCCTTGCTGCTGAGCTCATTCAGCGCAGACAACTTGGCTGCTTCCGATGACGATGGTGAGATGAACAACCTGCAGATCGCAGTTATTCGCATTAAGAAGGGAATCGCCTGGGTGAAGGCTAAAGTTCGAGAACTGGTCAACATCATCCTCGGGAGGAAGGTCACAGACGAAGCCAAGCCGCTTGATGACATGTACGACCGTAAACTGAACTGCATTGCCAATCACACAGGTGTGGACATCAGCCGTGACCTGGACTATCAGAAAAATGGCAACGGAACTACCAGTGGCATTGGCAGCAGTGTAGGAAAATACATGATTGACGATGACCACATGTCCTTCATCCACAACCCCAACCTGACAGTATGTGTGCCCATCGCTGTGGGCGAGTCGGACTTTGAGAATCTTAACACTGAAGATTTCAGCAGCGAGTCTGAGGCAGAGGGCAGCAAAGAATTGGATGACATCAGCTCTTCAGAGGGCAGCACCATAGATATTAAACCAGAGGTAGAGGAAGCAGTGGTGGTGGAGACGGTAGAGGAATATGTCGATCCAGAAGCTTGCTGGACTGAAGCTTGTATTGCCCGCTACAAGTGTTGCGATGTGCCCATCACGGAAGGCTGGGGCAAGAATTGGTGGTTTCTCCGAAAGACCTGCTATCTGATTGTGGAGCACAACTGGTTTGAAACCCTCATCATCTTCATGATCCTCCTCAGTAGTGGAGCACTGGCCTTTGAGGATGTGTATATTGAACAGAGGAAGACTATTCGAATCATTCTGGAGTATGCTGACATGGTCTTTACATACATCTTCATATTGGAGATGTTGTTAAAGTGGGTGGCCTATGGTTTTGTCAAGTACTTCACCAATGCTTGGTGCTGGCTGGACTTCTTCATTGTCGACGTGTCTATAGTCAGCCTTATAGCTAATGCGCTGGGCTACTCCGATCTAGGGCCCATTAAATCACTCAGGACACTAAGGGCCCTGAGACCCCTCAGAGCATTGTCACGTTTTGAAGGGATGAGGGTGGTAGTCAACGCCTTGGTGGGTGCCATCCCCTCCATTATGAATGTGTTGCTGGTTTGCCTCATCTTTTGGCTGATTTTCAGTATCATGGGTGTCAATATGTTTGCGGGAAagtactactactgctacaacgagACTGAAAAGGCATACTTTGAGCTAGATGTGGTCAACAACAAATCTGAGTGCTTTGCGTTAATTGAGCAAAACTACACTGAGGTGCGTTGGAAGAACGTCAAAATCAACTTTGACAACGTGGGTGCTGGTTACCTGGCTCTTCTGCAAGTGGCAACCTTTAAAGGATGGATGGACATCATGTATGCAGCAGTTGACTCACGAAGGGTGGAAGACCAGCCGAAGTATGAAGACAATATCTACATGTATATCTATTTTGTCATCTTCATTATATTTGGCTCTTTCTTCACCCTCAATCTCTTCATTGGTGTGATTATTGATAACTTCAACCAGCAGAAGAAAAAGTTTGGAGGTCAGGATATCTTCATGACTGAGGAACAGAAAAAGTACTACAATGCAATGAAAAAGCTTGGCTCAAAGAAACCTCAGAAGCCCATACCCAGACCCCAGAACAAGCTCCAGGGTATGGTGTTTGACTTTGTGACACAGCAGGTCTTTGATATTTCCATCATGATCCTCATCTGTTTGAACATGGTCACCATGATGGTTGAGACAGATGATCAATCACAGGAGACGGAAAACATTCTGTACTGGATCAACTTCATCTTTATTGTGGCCTTCACTTCAGAGTTTGTCCTGAAGCTCTTTGCGCTGCGTCATTATTACTTCACCAATGGCTGGAACATCTTTGACTGTGTTGTGGTCATTCTCTCTATCGTTGGTATGTTCCTGGCTGATCTGATTGAGAAGTACTTTGTGTCACCAACATTGTTCAGGGTAATCCGTCTGGCTCGAATTGGACGTATTTTGCGTCTGATCAAAGGAGCAAAGGGCATTCGGACTTTACTGTTTGCCTTGATGATGTCACTGCCGGCCCTGTTCAATATTGGCCTTTTGCTGTTCTTGGTTATGTTCATTTTCTCTATTTTTGGCATGTCAAACTTTGCCTACGTGAAGCGGGAGTCTGGCATAGATGACATGTATAACTTTGAAACATTTGGCAATAGCATGATCTGCCTGTTCATGATAACCACCTCAGCCGGATGGGACGGCCTTCTCGCTCCCATTCTCAACTACCCGCCAGATTGTGAGCCAACTAAAGAAAATCCAGGTACTAGTGTTAAAGGTAACTGTGGAAACCCTTCGGTGGGCATCTTCTTCTTTGTCATGTATATTATTGTCTCGTTCCTCATCGTGGTGAACATGTACATCGCCATTATTCTGGAGAACTTCAGCGTCGCGACAGAGGAGAGTGCTGACCCTCTTTGCGAGGACGACTTTGAGTCCTTCTATGAGATCTGGGAAAAGTTTGATCCTACTGCCTCCCAGTTTATCACTTTTGCCAAGCTGGGTGATTTCGCCGACACTTTGGAGCACCCACTACGTGTTCCTAAGCCCAACACTATAGAGCTGATCGCCATGGACCTGCCAATGGTGAGCGGCGACCGCATTCACTGCCTAGACATCCTGTTTGCATTCACCAAACGCGTGCTGGGTGATAGCGGCGACCTGGACATGATGCGGCAACAGATGGAGGAGCGTTTTATTGCTGCCAATCCTTCCAAAGTGTCTTTTGAGCCCATCACTACCACCCTGCGCCGCAAACAGGAGCATATGTCTGCTGGAGTCATCCAGCGTGCTTTCCGTGCCCATCTGATTCGGAAAGGCTTCATCTGCAAGCGTTTACTCAGCAGCAGCAGGCTGGAGAATGGTGGTACTAATCAGGACAAGAAAGAGGGCACACCTTCCACTGCCTCACTGCCATCCTACGACAGTGTGACCAAACCTGAGAAGGAGAAGTTGGAGGAGAGTGACAGTAAGGGCAAAAAGGGCAAAAACCAAAAAGATGTCAAggaatccaagttttaggaacgaTGGACACTGTCTAGTTGAGACTTAAACTATCTATTCCAACAAAATGTATAGAAGAAAATTTGCAACAAAAAACACTGATATCTTTGAGCAAAACAGTTGTTTACATACAACAAATGCACCGGTGCAACAGGAAAGCAGCTTGGTTTTTACAAGATTCAATGATGACCAAACCAACTTATGAGCTTACTGTCTTACATTTTGTGCTAAGTGACCAAGATTTTACTGTTCCAACTGCGGCCAAAAGGCACTTACAAGGACAAACTAAATAACAATCCATGGCAGAAATCTTTGATAGGGACCACCTGCCAATGGACAAACTAGTACAAAGCAAGCTCATAAGATGGCTTCCTTTGCACTCACATGTGTGTGGAGTTCAGCATTCCTCCGCTACGGACATCCCGTTCAAACACTACACTGCCGAAATCCGACGGAAACCTCCCACTCATCCCAGGAGGATTCTGGGACTTTGTATTTTAACCATAGGAGAACCAATAATAATGATGTTAACTCAATCATGTGGAGTGTCTgccgaaaaaaacaaacaaaaaaaacagaacattatGCAAGGGTTTTCAGTTGTTGTGATGAATATTTCACCTTATTTGATCCACAGAAAGTAGGGGAAAACGTTCAGCCCATTCATCTCGTCATCATCTCTTtgttatactaaaaa
>TCONS_00044199
CGTGATCCCAACACGACAACTAAAATTAACGCCTTTTATTGTGGAACCGGTGCTACCTATTGGCCGACACTCCCTTACATTTTGCTGGGAGTCATCAATTATGCAGGGTAACGGTGCACACTGAAGGAAGGTAGCAGCAACAATATGGCGACATCCGCAATTTCTTCCGAATTTATTCGACATCTGCAGTCCAGCGAGGATTTTTTGGATACCCGCTAACGCAATCATAAACTGGCTGCCGTGGAGGGTACATAACAGGAGAAGAAGTTGCTGCAGGATGAAAACATGGCTGCACCCCTTCTTGCACCGCCAGGACCTAACAGCTACAAATACTTTACCAGGGAATCACTCCGTGAAATCGAGAAGCGTATCGAGGAGGAGAAAGCCAAGCCGCCACCTAAGCCAGACAACAGCTATCGCGATGATGACGACGAGAACAAGCCCAAACCTAACGGTGACCTGGAGGCGGGCAAGAGTCTGCCCTTCATCTACGGGGACATCCCTCCTGGCATGGTGGCAACACCACTGGAGGATTTCGATCCCTTCTACATAAATCAGAAAACATTTGTAGTCCTAAATAAAGGGAAAACAATCTTCCGCTTTAGTGCCACACCTGCCTTGTACATGATAAGCCCTTTTAATCTTGCTAGACGAATAGCGATTAAAATTTTGATACATTCATTATTCAGCATGTTCATTATGTGTACGATTTTGACCAACTGTGTGTTCATGACTTTTAGTAATCCTCCCGAGTGGTCCAAACAAGTAGAGTATACTTTCACTGGAATTTATACGTTTGAATCAGCAGTAAAAATCATTGCCCGTGGATTCTGTATAGATGGCTTCACATTCCTTAGAGATCCATGGAACTGGCTGGATTTCATGGTCATCTCAATGGCATATGTAACAGAGTTTGTGGACCTGGGGAATGTATCTGCGCTGAGAACATTCAGAGTTCTCCGAGCATTGAAAACTATCTCTGTCATTCCAGGTCTGAAGACCATTGTTGGCGCTTTGATCCAGTCTGTGAAGAAGCTGTCAGATGTGATGATCCTCACCGTGTTCTGCCTCAGTGTCTTTGCCCTCATTGGTCTGCAGCTCTTCATGGGGAATCTGCGGCAGAAGTGTGTCATCTGGCCCATCAACATCACAGAAATGTTCCCAGATGTCAATGGCAGCCGTGCATTCAACTGGGACGAGTACATCTTGAATGAAACCAATTTCTACTTCCTGCCAGACCAGTTGGATGCACTTTTGTGTGGAAACAGCTCTGATTCAGGTCGCTGTCCTGAAGGTTACACATGCATGAAGGCTGGCCGTAATCCAAACTATGGCTACACCAGCTTTGACAGTTTTGGCTGGGCTTTCCTGGCTCTCTTCCGCCTCATGACGCAGGACTTCTGGGAGAACTTGTACCAGCTGACACTGAGAGCAGCAGGGAAGACCTACATGATTTTCTTTGTGCTGGTCATCTTTGTGGGCTCCTTCTATCTTGTGAATCTGATTCTGGCTGTGGTGGCCATGGCATATGAGGAGCAGAACCAGGCCACCATGGAGGAGGCGGAGCGAAAGGAGGCGGAGTTTAAAGCCATGCTGGAACAGCTGAAGAAACAGCAGGAGGACGCACAGGCAAATGCAATGGCGACGTCAGCGGGAACAGTGTCTGAGGACGTGGTGGAGGATGATGGAGATGGAGAAGGGAATTTGTCCTGCAGCTCGTCTGAGATGTCTAAACTGAGCTCCAAGAGTGCCAAAGAGAGACGCAACCGCAAGAAGAAGTGGCGGCAGAAAGAGCAGGACAAAGAGAAAGGGGACAGCGAGAAGTTTGTCAAATCCGAATCAGACGATGGAAGCAGAAGGAGATTTCGTTTCCCTGATAACCGTTTGGGCCGAAGGAGTTCCATAATGAACCAGTCTTTGCTCAGCATCCCAGGCTCTCCATTCCCTTCGAGGCGCAACAGTAAGAGCAGCATCTTCAGCCGCTGTAAAGACGGAGGCTCTGAGAACGAGTTTGCAGATGATGAGCACAGCACGGTTGAGGAGTACGACGAGCGGCGCGACTCCTTCCTAAGCCCTCAGCGTCGCAGCAGCTACACAGGCTTCTACGGCAAGCGCAACAGCACAGTGGATTGCAATGGAGTGGTGTCTCTCATTGGGCCGGGGCCTGGCGGACGCCTTCTGCCTGAGCCGACCACTGATCTTGAAATTAAGAAGAAACTCTCAGGCTCTCTCATGGTTTCCGTAGAGCAGCTTAACACATCATTCGGGCGCAAGGAGCGAGCAAACAGCGTGATGAGTGCGTTAACCAACACATTGGTTGAAGAACTGGAAGAGTCTCAGAGGAAATGTCCACCCTGCTGGTACAAATTCGCCAACACGTTTCTTATCTGGGAGTGTGGCCCTCTATGGATGTCGATAAAGGAGATTGTGAACCTGATTGTAATGGACCCTTTTGTGGACCTGGCTATCACCATTTGCATTGTGCTGAATACTCTCTTCATGGCCATGGAGCATTACCCGATGACGCCGCAATTTGAGCATGTGCTGTCTGTCGGAAACCTGGTGTTTACTGGAATCTTCACTGCCGAAATGTTTGCCAAACTGGTTGCAATGGACCCATACTACTACTTCCAGGAGGGCTGGAATATATTTGATGGCTTTATTGTGAGCTTGAGTTTGATGGAGTTGGGCTTGGCCAATGTGGAAGGTCTTTCTGTGCTGCGATCATTCCGATTGCTGAGAGTGTTCAAGTTGGCTAAGTCATGGCCCACTCTCAACATGCTGATAAAGATCATCGGTAATTCAGTCGGAGCTTTGGGGAACCTGACCCTGGTGTTGGCCATCATTGTCTTTATCTTTGCTGTTGTCGGCATGCAGTTGTTTGGGAAGAGCTACAAGGACTGTGTGTGCAAGATCGCTCAGGATTGTGAGCTGCCCCGTTGGCACATGAACGACTTCTTTCACTCTTTCCTTATTGTCTTCCGAGTGTTATGCGGAGAGTGGATCGAAACCATGTGGGACTGTATGGAGGTGGCTGGACAGGCCATGTGTCTCATCGTATTCATGATGGTCATGGTTATCGGGAACTTGGTGGTGTTGAATCTCTTCCTTGCCTTGCTGCTGAGCTCATTCAGCGCAGACAACTTGGCTGCTTCCGATGACGATGGTGAGATGAACAACCTGCAGATCGCAGTTATTCGCATTAAGAAGGGAATCGCCTGGGTGAAGGCTAAAGTTCGAGAACTGGTCAACATCATCCTCGGGAGGAAGGTCACAGACGAAGCCAAGCCGCTTGATGACATGTACGACCGTAAACTGAACTGCATTGCCAATCACACAGGTGTGGACATCAGCCGTGACCTGGACTATCAGAAAAATGGCAACGGAACTACCAGTGGCATTGGCAGCAGTGTAGGAAAATACATGATTGACGATGACCACATGTCCTTCATCCACAACCCCAACCTGACAGTATGTGTGCCCATCGCTGTGGGCGAGTCGGACTTTGAGAATCTTAACACTGAAGATTTCAGCAGCGAGTCTGAGGCAGAGGGCAGCAAAGAATTGGATGACATCAGCTCTTCAGAGGGCAGCACCATAGATATTAAACCAGAGGTAGAGGAAGCAGTGGTGGTGGAGACGGTAGAGGAATATGTCGATCCAGAAGCTTGCTGGACTGAAGCTTGTATTGCCCGCTACAAGTGTTGCGATGTGCCCATCACGGAAGGCTGGGGCAAGAATTGGTGGTTTCTCCGAAAGACCTGCTATCTGATTGTGGAGCACAACTGGTTTGAAACCCTCATCATCTTCATGATCCTCCTCAGTAGTGGAGCACTGGCCTTTGAGGATGTGTATATTGAACAGAGGAAGACTATTCGAATCATTCTGGAGTATGCTGACATGGTCTTTACATACATCTTCATATTGGAGATGTTGTTAAAGTGGGTGGCCTATGGTTTTGTCAAGTACTTCACCAATGCTTGGTGCTGGCTGGACTTCTTCATTGTCGACGTGTCTATAGTCAGCCTTATAGCTAATGCGCTGGGCTACTCCGATCTAGGGCCCATTAAATCACTCAGGACACTAAGGGCCCTGAGACCCCTCAGAGCATTGTCACGTTTTGAAGGGATGAGGGTGGTAGTCAACGCCTTGGTGGGTGCCATCCCCTCCATTATGAATGTGTTGCTGGTTTGCCTCATCTTTTGGCTGATTTTCAGTATCATGGGTGTCAATATGTTTGCGGGAAagtactactactgctacaacgagACTGAAAAGGCATACTTTGAGCTAGATGTGGTCAACAACAAATCTGAGTGCTTTGCGTTAATTGAGCAAAACTACACTGAGGTGCGTTGGAAGAACGTCAAAATCAACTTTGACAACGTGGGTGCTGGTTACCTGGCTCTTCTGCAAGTGGCAACCTTTAAAGGATGGATGGACATCATGTATGCAGCAGTTGACTCACGAAGGGTGGAAGACCAGCCGAAGTATGAAGACAATATCTACATGTATATCTATTTTGTCATCTTCATTATATTTGGCTCTTTCTTCACCCTCAATCTCTTCATTGGTGTGATTATTGATAACTTCAACCAGCAGAAGAAAAAGTTTGGAGGTCAGGATATCTTCATGACTGAGGAACAGAAAAAGTACTACAATGCAATGAAAAAGCTTGGCTCAAAGAAACCTCAGAAGCCCATACCCAGACCCCAGAACAAGCTCCAGGGTATGGTGTTTGACTTTGTGACACAGCAGGTCTTTGATATTTCCATCATGATCCTCATCTGTTTGAACATGGTCACCATGATGGTTGAGACAGATGATCAATCACAGGAGACGGAAAACATTCTGTACTGGATCAACTTCATCTTTATTGTGGCCTTCACTTCAGAGTTTGTCCTGAAGCTCTTTGCGCTGCGTCATTATTACTTCACCAATGGCTGGAACATCTTTGACTGTGTTGTGGTCATTCTCTCTATCGTTGGTATGTTCCTGGCTGATCTGATTGAGAAGTACTTTGTGTCACCAACATTGTTCAGGGTAATCCGTCTGGCTCGAATTGGACGTATTTTGCGTCTGATCAAAGGAGCAAAGGGCATTCGGACTTTACTGTTTGCCTTGATGATGTCACTGCCGGCCCTGTTCAATATTGGCCTTTTGCTGTTCTTGGTTATGTTCATTTTCTCTATTTTTGGCATGTCAAACTTTGCCTACGTGAAGCGGGAGTCTGGCATAGATGACATGTATAACTTTGAAACATTTGGCAATAGCATGATCTGCCTGTTCATGATAACCACCTCAGCCGGATGGGACGGCCTTCTCGCTCCCATTCTCAACTACCCGCCAGATTGTGAGCCAACTAAAGAAAATCCAGGTACTAGTGTTAAAGGTAACTGTGGAAACCCTTCGGTGGGCATCTTCTTCTTTGTCATGTATATTATTGTCTCGTTCCTCATCGTGGTGAACATGTACATCGCCATTATTCTGGAGAACTTCAGCGTCGCGACAGAGGAGAGTGCTGACCCTCTTTGCGAGGACGACTTTGAGTCCTTCTATGAGATCTGGGAAAAGTTTGATCCTACTGCCTCCCAGTTTATCACTTTTGCCAAGCTGGGTGATTTCGCCGACACTTTGGAGCACCCACTACGTGTTCCTAAGCCCAACACTATAGAGCTGATCGCCATGGACCTGCCAATGGTGAGCGGCGACCGCATTCACTGCCTAGACATCCTGTTTGCATTCACCAAACGCGTGCTGGGTGATAGCGGCGACCTGGACATGATGCGGCAACAGATGGAGGAGCGTTTTATTGCTGCCAATCCTTCCAAAGTGTCTTTTGAGCCCATCACTACCACCCTGCGCCGCAAACAGGAGCATATGTCTGCTGGAGTCATCCAGCGTGCTTTCCGTGCCCATCTGATTCGGAAAGGCTTCATCTGCAAGCGTTTACTCAGCAGCAGCAGGCTGGAGAATGGTGGTACTAATCAGGACAAGAAAGAGGGCACACCTTCCACTGCCTCACTGCCATCCTACGACAGTGTGACCAAACCTGAGAAGGAGAAGTTGGAGGAGAGTGACAGTAAGGGCAAAAAGGGCAAAAACCAAAAAGATGTCAAggaatccaagttttaggaacgaTGGACACTGTCTAGTTGAGACTTAAACTATCTATTCCAACAAAATGTATAGAAGAAAATTTGCAACAAAAAACACTGATATCTTTGAGCAAAACAGTTGTTTACATACAACAAATGCACCGGTGCAACAGGAAAGCAGCTTGGTTTTTACAAGATTCAATGATGACCAAACCAACTTATGAGCTTACTGTCTTACATTTTGTGCTAAGTGACCAAGATTTTACTGTTCCAACTGCGGCCAAAAGGCACTTACAAGGACAAACTAAATAACAATCCATGGCAGAAATCTTTGATAGGGACCACCTGCCAATGGACAAACTAGTACAAAGCAAGCTCATAAGATGGCTTCCTTTGCACTCACATGTGTGTGGAGTTCAGCATTCCTCCGCTACGGACATCCCGTTCAAACACTACACTGCCGAAATCCGACGGAAACCTCCCACTCATCCCAGGAGGATTCTGGGACTTTGTATTTTAACCATAGGAGAACCAATAATAATGATGTTAACTCAATCATGTGGAGTGTCTgccgaaaaaaacaaacaaaaaaaacagaacattatGCAAGGGTTTTCAGTTGTTGTGATGAATATTTCACCTTATTTGATCCACAGAAAGTAGGGGAAAACGTTCAGCCCATTCATCTCGTCATCATCTCTTtgtt

Function

symbol description
scn8aa Enables voltage-gated sodium channel activity. Acts upstream of or within several processes, including mechanosensory behavior; motor neuron axon guidance; and sodium ion transmembrane transport. Predicted to be integral component of plasma membrane. Predicted to be part of voltage-gated sodium channel complex. Predicted to be active in axon. Is expressed in heart; nervous system; otic vesicle; and trigeminal placode. Human ortholog(s) of this gene implicated in benign familial neonatal epilepsy and developmental and epileptic encephalopathy 13. Orthologous to human SCN8A (sodium voltage-gated channel alpha subunit 8).

GO:

id name namespace
GO:0019228 neuronal action potential biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0007638 mechanosensory behavior biological_process
GO:0086010 membrane depolarization during action potential biological_process
GO:0006811 ion transport biological_process
GO:0008045 motor neuron axon guidance biological_process
GO:0006814 sodium ion transport biological_process
GO:0008345 larval locomotory behavior biological_process
GO:0035725 sodium ion transmembrane transport biological_process
GO:0030424 axon cellular_component
GO:0001518 voltage-gated sodium channel complex cellular_component
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005216 ion channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005248 voltage-gated sodium channel activity molecular_function
GO:0005261 cation channel activity molecular_function
GO:0005272 sodium channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000828-1 Enables voltage-gated sodium channel activity. Acts upstream of or within several processes, including mechanosensory behavior; motor neuron axon guidance; and sodium ion transmembrane transport. Predicted to be integral component of plasma membrane. Predicted to be part of voltage-gated sodium channel complex. Predicted to be active in axon. Is expressed in heart; nervous system; otic vesicle; and trigeminal placode. Human ortholog(s) of this gene implicated in benign familial neonatal epilepsy and developmental and epileptic encephalopathy 13. Orthologous to human SCN8A (sodium voltage-gated channel alpha subunit 8).

Ensembl:

ensembl_id ENSDARG00000005775

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044198 False 6814 mRNA 0.47 27 27251626 27345425
TCONS_00044199 True 6804 mRNA 0.47 27 27251636 27345425

Neighbor

gene id symbol gene type direction distance location
XLOC_022399 si:dkey-157g16.6 coding downstream 6391 27134942 ~ 27245235 (-)
XLOC_022400 NA coding downstream 52531 27191956 ~ 27199095 (-)
XLOC_022398 stat6 coding downstream 128446 27078866 ~ 27123180 (-)
XLOC_022397 zgc:66440 coding downstream 190554 27041111 ~ 27061072 (-)
XLOC_022396 NA coding downstream 236466 26961010 ~ 27015160 (-)
XLOC_022402 dip2ba coding upstream 13297 27358722 ~ 27442544 (-)
XLOC_022403 atf7a coding upstream 101504 27446929 ~ 27479558 (-)
XLOC_022404 asb8 coding upstream 149666 27495091 ~ 27506161 (-)
XLOC_022405 larp4aa coding upstream 166284 27511709 ~ 27547931 (-)
XLOC_022406 pfkma coding upstream 208361 27553786 ~ 27571667 (-)
XLOC_022393 NA non-coding downstream 492066 26749407 ~ 26759560 (-)
XLOC_022392 CR855310.1 non-coding downstream 575856 26675652 ~ 26675770 (-)
XLOC_022380 BX005414.1 non-coding downstream 1458533 25789132 ~ 25793093 (-)
XLOC_022408 CR354381.1 non-coding upstream 234739 27580164 ~ 27580292 (-)
XLOC_022412 NA non-coding upstream 307471 27652896 ~ 27675394 (-)
XLOC_022415 NA non-coding upstream 381870 27727295 ~ 27729454 (-)
XLOC_022416 NA non-coding upstream 425056 27770481 ~ 27772372 (-)
XLOC_022417 NA non-coding upstream 442944 27788369 ~ 27795923 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00008906 LOC108433193,LOC104932970 coding CM030126.1 CM030126.1 14419818 ~ 14455800 (+)