XLOC_025641 (BX537305.1)


Basic Information

Item Value
gene id XLOC_025641
gene name BX537305.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 42497814 ~ 42504515 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050490
ATGTCGGATCTTGACAGAGTTTTAGAGGAAGGGGATGCCTTGTATGTCAGCGTTAAAATGCAGCTCATCGCTGAAAACAGATTCAGTCATGACTATCTGTCCATGGAGGAAGTACCTTTTGGACTTTCAACATTTAACCAAACATACAATGTTCAGAAGTCGGAAGTCAAGGTTGGATTTTTTCGAGCCAAAGGTTCCCCTGACACGGAAGAATGGTTTTTGCCTCTTCCTGAAAGACTGCAGTGTCTCGCAGTGGATGTCACGCAtgcacttttaatagtttcttCAGAATGCATTGCGGTGTTTAGAGATGGATCAGGCAGATATGGATTCTTTGATCCACATTCAAGGACATTTGAAGGAGAAGAGGCCCTGGCTGGTGGTGGAACAGCTGTCATGTTAACTTTTACTCGCCTAAGTGACATGACTGAACAAATTCTTAAGCTCTTCAACCATTGCCGTGATGACCAATCCTATGAATTCATGTCTGTGTCTTTTGAAATGGAGCAACAGGCAGGCCAGCAGCCTTCACCATCAGCTCGTGAACCAATTTCAGAAGTAATCTCAGTTCTACCAGAACCAGATGAAAATGCAGCTGTTCCCAGAGGAGCTGAAAGCCGCCAACCCATGGTAGCCAGAGTAAATAAGGCACGGAGAAGAAAAGAATTGCGTAAAGCAATCGATAATTTAAAATCCAAGGACACAGCTAAATCTTATGTGAACCGAAAACACAAACAAAGAGATGATGAGAGGGGCCAGTATTCCGCCTGTTTGCAGTATCGGACAAATAAAAAAGAAGCTCTTAAGCAAAAGTATGGTCAGGATGCTCTCAttagaaacaaaaagaaaagctACATGGCTAGACGATACAGAGAGGAGATTGTCCGATCTAAAAAGAAGGAGGATATGATAAGACGATATCGCACAGATCctgtatttcagaaaaaaaagagagcatACATAGTCCGGAGgtacagtacagatactgccttccAGAAGAAAATGAGAACGTACATGGTCCGAAGGTACAGTACCGATGCTGTCTTTCAGAAGAAAATGAGAACGTACATGATGCAAAGGTACAGTACCGATACTGTCTTTCAGAAGAAAATGAGAATGTACATGATCCAAAGGTACAGTACCGATACTGTCTTTCAGGCAAAAATGAGAGCGTACATGGTCAGGAGGTACAGTACCGATACTGtgtttcagaaaaaaatgaaGGATTACATGAAGAGGAGGTATACAAATGACTCTGAATTCAGAAAACATCACATTCTCCGATGTACCCTCCACAAGAACCAGAAGCTTGCTAGTGATGCTACATCACGTATTCTTCATCAGTTGCAATGTGCACTGAGGATTAAAAGGAAATATAAGATGTACATCCGCTCCAGCCATGAAACAGCCCAGCCAACAGTCAGCAAAGTGATGGAAAGTGCAATTCAAGCATTCCAGTGTAAGATCCAGCAAGGTCCTACATACGTCTGCACTGTTTGTCACAGAGCCCTCTTTCCAGACCAGGTCAAGGCCTGTGACCGGTCAAACTACGAAAAAGATGTTCAACTTTCATCATTTTGCTTGACCAAGCAGTATGTACATACTTGCGACAGTGCCTGCTCAGATGATTGCACTGTTCCAGAGGAAAGAAGACGGGAATGGATCTGCCACACTTGTGACAGCCATCTTAAAAGAGGACACATGCCTTCAATTGCAGCAGTAAACAAGCTTGAACTGCCACCTATCCCTGCAGAATTGGCTGAGTTGAATGTACTAGAACGTCAGCTTATCGCAAAAATCTTGCCTTTTGCAAAAATAGTTGCACTGCCCAAAGGACAACAGAGAGCAGTTCAcggtgctgttgtgtgtgtgccttCGGAGGTGGAGAACACTGTAAACTCTCTGCCAAGACCAAGAAGCGAGTCCCAGCTCCTACAGGTCAAGCTGAAGAGACATGTCAGTTTTAAAGGATACCAGCACTTCCATACTGTAAATATGCACAGCGTGCTGGCAGCTttgtctaagctgaaggaaatgcaTTCAGAGTACAAGGATATCTCCATAACAGAGCCTGAGGTATCTGAAGATCAGTTTGACGAAGACATTGATGCAGCAGAGGATAACCAAGAAGTTGGCCATTCTGAGCAGGAGGAGCAACACGTTAGTGTGGAGGAAAAAGACGAACTTAGACCCGGTCTCACCTTAGATACGTGCATGCAGCCACCAGACATTGCACAGGACATCTTGTCTTACGGTGAAGGGATCTTTAGTATCGCACCTGCACAAGGAAAAAAGCCTGTTGGATTTTTTAAAATCCCAAAACTGGAAGCCATGGCATTCCCTGTCCAGTTCCCCACTGGAGAGAACACAATTGACGAGGCAAGGCAGACAGCCATTTCTCCTAGCATGTACTTCAACGTCAGATTGTTTTGTGTTGATGCCCGATTTGCAAGGGATCAAAGCTACCTTTTCTTTGCACAATTTGTGACAGAAACGCAACTGGCAAGAAACAGCATGTCCATTCAGCTTCGAAAAGGTAAACCCATTACCAGAGATGGCCGAAGAATCTCCAATAGGATGCTTCAGGATTCCGATGAGGTTGAGAGACTTGTTCACAACAGGGATGCCACACGATTCATGCAGCCCCTGAGAGGCTCTCCAGCCTACTGGGAGAAGACGTTGCGAGATCTCCAGGCCATGATTCGACAGCTGGGGACACCTACTTTCTTTTGTACATTCAGTGCAGCAGAAATGCGATGGCCTGAGATTGTGACTGTAATCAAAGCTCAACAAGGCGAAGAGATTGACTTTTCACAGCTTGACTGGGCAACAAAATGTGAAATCCTTAGGAGTAATCCTGTCACTGTCATGCGCATGTTTGAGAAGCGTGTAGATGCATTAATGGCTCACCTGCTTTTGTCACCTGCACAACCCATTGGTGAAGTGGAGGATTTCTTTTATAGAGTGGAGTTTCAGGCGAGAGGAAGCCCACATATTCATCTGCTTGCTTGGGTAAAGGATGCCCCAGATCCAGAGGAAGATAATGATGAGACAATATGTGACTTCATCGACCGTTACGTATCGTGCAAGCTTCCAGATCCCAATGTTGATCCTGAGCTTCATAAGATTGTGACGGAGGTTCAGCTTCATAGCAGAAACCACTCAAAGTCATGCAAGAAAGGCAAGGTGGTGTGTAGATTTGGATTTCCAAAACTACCAATGCCTAAGACCATGATCACTCATCCCATGCCAGAGCGTCCTGATGAGGGGGATGATGAACCTACTGACTCAGCGGCCAAGAAGAAAGCAAGGCGAGATGCGGCTAAAAAAGCAATGAATGAAGCCAAATCAAAACTCAAGCCTTTGTGGGATTTGCTGAATGATCCCAAATCTTCCTTCGACAATTTGTCAGACCTTCTAACCAAGTGCAATTTGTCCATGGACGATTACCTGAACTACGCTGAAGGACTCACCACTGGCAGTGCAGTTCTTTTGAAGCGTGATCCAAAGGAGACTTGGGTGAATGGCTACAATCCTGATTTGCTCAGGGCATGGAATGCAAACATGGATATTCAGTACATCCTAGACGCTTACAGCTGCATCATGTATATGCTGTCCTACGTTTCAAAGCCGGAGCATGAAATGAGTGGCTTTCTTAAGAACGTTATCCAGAGTGTTCGAGAAGCCAACGTTAATGAAGAGGACGAAATGAAGCACATAATGCAAGCCTATGCCAAGCACCGGCAAGTAAGTGCTCAGGAGTCCGTTGCGCGAACATGCAGCTTGCCGTTGAAGAGGTGTTCACGAAGTGTCGTGTTTGTTCCGACAGATGACGATGCCCTCAAGATGAGTCTGCCCATAAGTGTGTTGCTGAACAAAAATCCTGAATCGGAGGACGTCTGGATGTCAGGTTTAATAGAAAAATACAGAGCAAGACCTCTAACGTTGGAGTTTGAAAAAATGTGTCTTGCGGACTTTGCATCCAATTACCGTGTTGTGTACGGTCAGCAAATTAAAGGAAAAAATGTCCTCCGACTGCTTCACGATATGGGATTTATTCAAAAGAGGACTGTTGGCAAGCCTGCAGTTATCAGATATGCTCGCTTTTCAGAGGAGAAGCAACCGGAAAAATTTTACGGAAGAATGGTGAAACTTTACGTTCCCCATCGCCACAATGCAGAGCTAAAACCTGAGGATTTTCCCACATATCAGCTATTTTATAAAAGCGGATTTGTGGAACTTCCTGGACATCCTGGTCTCCGGTTCCCTGTCTGCGGCATAGTAAAGGCATACCAGCAGAGATATGAAAAGCACGGCAAAGTCGTAGATAAAGCATTTGAACAACTTCAGCAGGAAGGACCATCTGAGAGTGCTTGGACAGCTTTTGCACCAGAAGTTGAAGTGGATCGCCTGGAATGCATAGCTGAGCAAGAAGACGTCGGTCCAGAGGAAGACGAACAGGATGAGGTTCCTGAATTCCAGCCTCGTAATGAAGATGGCGACGGAGTTGCACCACGCATAGAGGCGCCACAGATGAGTGTCGAGTTTGTCAGGAAACTCTTTAGAAGTTTAAACAAGACACAGGCAGCCATATTTTACACCATTCGGCAGTGGTGTCAGAACAGAGTATGGGGACTGAATCCAGAACAGTTTTTTTACTTCGTGTCCGGTGGTGCTGGATGTGGAAAGTCGCACGTAATCAAGTGTGTATACACTGAAGCAACAAAGATTCTGCGACAACTTCCTCAGCTCCGGGAGGATGGAGATCTCTCCATTCCTACAGTGCTTTTGAGTGCATTCACTGGAACCGCAGCGTTTAACATTTCTGGAAAAACTCTGCATTCCATTCTAAAGCTGCCAAAGAACCTGAAGCCACCCTATCAAGGGCTTGGGAACTCTCTTGATGATGTACGAGCTGAATTACGTCATGTGGAAATCTTGATTATTGACGAAATCTCTATGATCTCAAAAGATTTTTTTGCATACATCAACTGGAGGTTTCAACAGATCAGAGGCAGCAAGAAACCCTTTGGGGGCATTTCTGTCATAGTGGTGGGAGACTTTTATCAATTACCACCCCCAGGAAAAGCCAAGCCACTCTGCGTTTACGAAGAGGATGTGCTGGACTTTTGGAAAGACCACTTCCAAATTGTAACCCTCACGGAGATCATGCGGCAGAAAGAGGACCTTTCATTTGCCCAGCTTTTAAACCGACTGAGAGTGAAACGGAAGTCTGATGCTCTTAAAGAAGAAGATAGAGCTTTGTTATTGCAAGCTGTGAAGAATCCCCAAGACTGCCCACGGGATGCATTGCACATATTTGCAACCAACAAGGAAGTCCACAGTCACAATTGTGAGACGGTAAACGCTCTTCATGCTGACATCGTAACCATTGATGCTGAAGACTACCGAAAAGACCCAAGAACAGGAGGTATGAAAAGGCAGACTAAACCTGTGATGGGTAAAAAAGACAACCTGCTTGACACCATACAAGTTGCAGTGGGAGTCCGCATAATGGTAATTAGGAATCTGGATGTCGAAGATGGACTCGTCAATGGATGTTTTGGAAAAATTGGAAACATTGTGACTAAAACAAGAGACGGAATTGCATTTGTGCACATGCTTGGAATTCAGCCCGACAATCCAAATGCTGGGCAGAAATACAGACGACGGCTGCAAGGTGAAGAGGACACTTTAGTCTACATCGAAAGATCAGAGGAACCTCTGAAGAAAGGAACAGTCCGTCGACAATTTCCAATCAAGTTGGCCTACGCATGCACCGCTCACAAAGTTCAAGGCATGACCATGCAATCGGCTGTAGTGTCACTAAAGAAGATTTTTGAGCCAGGAATGGCCTACGTTGCCCTTAGCCGAACAACCTCACTTGGTGGTTTATACATCAGAGACTATGACGAGAAAAAGATCTATGCTGATCCGGAAATCACAACCTCGTTGGAGAGGATGAAAATGGCAACGCTGGAAGGCATCATGCCACTATTCCACTTGAAGAAAACCAACACCAATCTGTTAGAAACACTTATCATTGTGCATCATAACACAGAGGGACTCCAATCACATATAGAAGACATCAAACACCATCATGAGCTGCTTCTATGTGATATCTTTTGTGTTACGGAAACGCACCTCTCCGGATCATGCATCTCATCACATGTCCAGTTGGAAGGCTTTAAGATGTTTGCAAGAAATAGACATGCGTCTTACTCAACCCTTCCAGAAATGGCAAAGAAGGACTGTGGTGGAGTTGCAATTTATTGCAAAGAAGACATCCAGGCGGAACCTCGACACTTTATACACCACGTCACCGACCTGGAGTTTGTCGTCATCAAAGTTGATGCACCAGTGACTGCAACAATTGCTGCGGTGTACAGGCCACCAGACTTTAGTCTGGGAAAATTTTTGCCAAACATCAGGGGCCTTCTTGATTATTTGGAAATGATGAAGGAGAATCCCATAATTGTCTGTGGAGACTTCAACGAAGACCACCTCTCGCCTGGAAAAAAGCCCATTCTGGAGTTGTTTCAATCCCAACAATACCAACAGCTCATCACCATGGCAACCACAGAGAAACAAACACTGTTGGATCATATTTATGTTTCTCATCCAGACTTGTGCATGCAGTCAGGTGTTTTACACACCTACTATAGCTATCACAATCCAGTGTATTGTGTTTTGCCTAAATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113834

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050490 True 6702 mRNA 0.45 1 42497814 42504515

Neighbor

gene id symbol gene type direction distance location
XLOC_025640 NA coding upstream 48 42490459 ~ 42497766 (+)
XLOC_025639 NA coding upstream 290840 42194210 ~ 42206974 (+)
XLOC_025638 mrm2 coding upstream 368749 42126062 ~ 42129065 (+)
XLOC_025637 snx8a coding upstream 377642 42090418 ~ 42120172 (+)
XLOC_025636 NA coding upstream 535068 41954893 ~ 41962746 (+)
XLOC_025642 NA coding downstream 2967 42507482 ~ 42509830 (+)
XLOC_025643 NA coding downstream 250142 42754657 ~ 42755168 (+)
XLOC_025644 psmg3 coding downstream 414331 42918846 ~ 42920062 (+)
XLOC_025645 tmem184a coding downstream 418760 42923275 ~ 42957609 (+)
XLOC_025646 ints1 coding downstream 494762 42999277 ~ 43060971 (+)
XLOC_025429 BX649540.1 misc upstream 12248778 30248739 ~ 30249036 (+)
XLOC_025630 BX537310.1 non-coding upstream 997289 41500409 ~ 41500525 (+)
XLOC_025629 NA non-coding upstream 1431400 41043023 ~ 41066414 (+)
XLOC_025648 NA non-coding downstream 597495 43102010 ~ 43135493 (+)
XLOC_025649 NA non-coding downstream 695802 43200317 ~ 43328759 (+)
XLOC_025652 CU138533.2 non-coding downstream 1145526 43650041 ~ 43653791 (+)

Expression


Co-expression Network