LOC118941521


Basic Information

Item Value
gene id LOC118941521
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61881330 ~ 61882333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037827.1
ACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGCGACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGGCACTGGGGGTAGGCGACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGCGACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGGCACTGGGGGTAGGTTACC
>XR_005037828.1
ACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGCGACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGGCACTGGGGGTAGGCGACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGCGACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGACACTGGGGGTAGGTTACCGTAGCGTAGGCACTGGGGGTAGGTTACC

Function

NR:

description
extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037827.1 False 839 mRNA 0.58 3 61881330 61882333
XR_005037828.1 True 867 mRNA 0.58 3 61881330 61882333

Neighbor

gene id symbol gene type direction distance location
trim9 trim9 coding upstream 28449 61746138 ~ 61852881 (+)
LOC110498259 LOC106603387 coding upstream 175187 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 451873 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 480066 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 498984 61362432 ~ 61382346 (+)
nin LOC106611458 coding downstream 41993 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 138261 62020594 ~ 62038893 (+)
map4k5 LOC106611444 coding downstream 213108 62095441 ~ 62210453 (+)
cdkl1 cdkl1 coding downstream 334770 62217103 ~ 62244281 (+)
l2hgdh l2hgdh coding downstream 366394 62248727 ~ 62273364 (+)
G1646381 NA non-coding upstream 40008 61839917 ~ 61841322 (+)
G1646379 NA non-coding upstream 45417 61829990 ~ 61835913 (+)
G1646361 NA non-coding upstream 85266 61795814 ~ 61796064 (+)
G1646345 NA non-coding upstream 121055 61755875 ~ 61760275 (+)
G1646335 NA non-coding upstream 136328 61742083 ~ 61745002 (+)
G1646388 NA non-coding downstream 1053 61883386 ~ 61884027 (+)
G1646390 NA non-coding downstream 11614 61893947 ~ 61894367 (+)
pygl LOC106611459 non-coding downstream 15964 61863637 ~ 61899051 (+)
G1646394 LOC106603106 non-coding downstream 32328 61914661 ~ 61915497 (+)
G1646294 NA other upstream 320246 61558041 ~ 61561084 (+)
G1646225 NA other upstream 536176 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 589489 61242422 ~ 61308910 (+)
G1646089 NA other upstream 677978 61200860 ~ 61203352 (+)
G1645444 NA other upstream 1142373 60718758 ~ 60738957 (+)
G1646509 NA other downstream 261850 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 604668 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1134622 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1192816 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1320423 63202756 ~ 63204057 (+)

Expression


Co-expression Network