G1646390


Basic Information

Item Value
gene id G1646390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61893947 ~ 61894367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883689
TAATCATCATTATCCCTCATGTACCTCTAGTTAATAATGACTATATCAGGTAATCATCATTATCCCTCATGTACCTCTAGTTAATAACTATATCAGGTAATCATCATTATCCCTCATGTACCTCTAGTTAATGACGACTTTATCAGGTAATCATCATTAtgacttccagaggcagtttggaactcggtagtgagtgttgcaaccgaggacagattatttttacgcGCTTTCAGCACTTGCCGGTCCCGTtccgtgagcttgtgtggcctaccacttcgcggctgaaccgttgttgctcctagacattttcacttcacaataa

Function

NR:

description
PREDICTED: protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883689 True 322 lncRNA 0.41 2 61893947 61894367

Neighbor

gene id symbol gene type direction distance location
LOC118941521 NA coding upstream 11614 61881330 ~ 61882333 (+)
trim9 trim9 coding upstream 41066 61746138 ~ 61852881 (+)
LOC110498259 LOC106603387 coding upstream 187804 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 464490 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 492683 61392572 ~ 61401264 (+)
nin LOC106611458 coding downstream 29959 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 126227 62020594 ~ 62038893 (+)
map4k5 LOC106611444 coding downstream 201074 62095441 ~ 62210453 (+)
cdkl1 cdkl1 coding downstream 322736 62217103 ~ 62244281 (+)
l2hgdh l2hgdh coding downstream 354360 62248727 ~ 62273364 (+)
G1646388 NA non-coding upstream 9920 61883386 ~ 61884027 (+)
G1646381 NA non-coding upstream 52625 61839917 ~ 61841322 (+)
G1646379 NA non-coding upstream 58034 61829990 ~ 61835913 (+)
G1646361 NA non-coding upstream 97883 61795814 ~ 61796064 (+)
G1646345 NA non-coding upstream 133672 61755875 ~ 61760275 (+)
pygl LOC106611459 non-coding downstream 3930 61863637 ~ 61899051 (+)
G1646394 LOC106603106 non-coding downstream 20294 61914661 ~ 61915497 (+)
G1646412 NA non-coding downstream 68284 61962651 ~ 62023734 (+)
G1646414 NA non-coding downstream 70398 61964765 ~ 61965487 (+)
G1646294 NA other upstream 332863 61558041 ~ 61561084 (+)
G1646225 NA other upstream 548793 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 602106 61242422 ~ 61308910 (+)
G1646089 NA other upstream 690595 61200860 ~ 61203352 (+)
G1645444 NA other upstream 1154990 60718758 ~ 60738957 (+)
G1646509 NA other downstream 249816 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 592634 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1122588 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1180782 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1308389 63202756 ~ 63204057 (+)

Expression


Co-expression Network