G1646412


Basic Information

Item Value
gene id G1646412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61962651 ~ 62023734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883715
tcatgggagaggagagagagacatggaggtggaggaggagattttaaccaggtaggctagttgaaaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccagataggctagttgagaacacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttcaccaggtaggccagttgagaacacctttatttcaccaggtaggccagttgagaacacctttatttcaccaggtaggccagt

Function

NR:

description
PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883715 True 325 lncRNA 0.43 3 61962651 62023734

Neighbor

gene id symbol gene type direction distance location
pygl LOC106611459 coding upstream 63986 61863637 ~ 61899051 (+)
LOC118941521 NA coding upstream 80318 61881330 ~ 61882333 (+)
trim9 trim9 coding upstream 109770 61746138 ~ 61852881 (+)
LOC110498259 LOC106603387 coding upstream 256508 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 533194 61407641 ~ 61430060 (+)
map4k5 LOC106611444 coding downstream 71707 62095441 ~ 62210453 (+)
cdkl1 cdkl1 coding downstream 193369 62217103 ~ 62244281 (+)
l2hgdh l2hgdh coding downstream 224993 62248727 ~ 62273364 (+)
sos2 sos2 coding downstream 252377 62276111 ~ 62379517 (+)
cdkn3 cdkn3 coding downstream 395622 62419356 ~ 62422349 (+)
G1646394 LOC106603106 non-coding upstream 47154 61914661 ~ 61915497 (+)
G1646390 NA non-coding upstream 68284 61893947 ~ 61894367 (+)
G1646388 NA non-coding upstream 78624 61883386 ~ 61884027 (+)
G1646381 NA non-coding upstream 121329 61839917 ~ 61841322 (+)
G1646475 NA non-coding downstream 16611 62040345 ~ 62042161 (+)
G1646476 NA non-coding downstream 19125 62042859 ~ 62056596 (+)
G1646485 NA non-coding downstream 53523 62077257 ~ 62077714 (+)
G1646486 NA non-coding downstream 59450 62083184 ~ 62084341 (+)
G1646489 NA non-coding downstream 65428 62089162 ~ 62089482 (+)
G1646294 NA other upstream 401567 61558041 ~ 61561084 (+)
G1646225 NA other upstream 617497 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 670810 61242422 ~ 61308910 (+)
G1646089 NA other upstream 759299 61200860 ~ 61203352 (+)
G1645444 NA other upstream 1223694 60718758 ~ 60738957 (+)
G1646509 NA other downstream 120449 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 463267 62486921 ~ 62493719 (+)
G1647342 NA other downstream 993221 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1051415 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1179022 63202756 ~ 63204057 (+)

Expression


Co-expression Network