pygl (LOC106611459)


Basic Information

Item Value
gene id pygl
gene name LOC106611459
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61863637 ~ 61899051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955307.1
GCACCAATGTACattagagaggatagagaggaggagacggATGCCACAGAAATGCTAGGACCTATACTTCACTTCGCCACTTCATGGTTATTAAAGTTGAAGACGGACAGCAGCAGTTTTGTTCAGCAGCATGGCGTCGCCTCTAACTGACCTGGAGAAGCGTAAACAGATCAGTATCAGGGGAATAGTCGGTGTCGAGAACGTCGCCGAGTTGAAGAAAGGTTTTAACCGACATCTCCACTTCACTTTGGTCAAAGACCGGAACGTAGCGACGCCGCGGGATTATTACTTCGCCCTCGCGCACACGGTTCGAGATCACCTGGTGGGAAGATGGATCAGAACGCAACAGTTTTACTATGAGACCGATCCCAAGCGGGTGTACTACCTCTCCCTGGAGTTCTACATGGGCAGAACCCTCCAGAACACCATGATTAACCTGGGGCTGCAGAACGCCTGTGACGAGGCCATCTACCAGCTGGGTTTGGACATGGAGGatctggaggagatggaggaggatgcAGGGCTGGGGAACGGAGGCCTAGGCAGACTGGCAGcatGTTTCCTGGACTCGATGGCCACCCTGGGTCTGGCAGCGTACGGTTACGGCATCCGTTATGAATATGGGATCTTCAATCAGAAGATCAAGGAAGGTTGGCAGGTGGAAGAGGCAGATGATTGGCTGCGTCATGGTAACCCCTGGGAGAAGGCCCGCCCTGAGTACATGCTACCTGTGCACTTCTACGGCAGAGTGGAGGAGTCTAAGGAAGGGGCCAGATGGGTGGATACGCAGgtgGTCCTGGCCATGCCCTATGACACGCCCATCCCTGGATATATgaacaacacagtcaacaccatgaGGCTGTGGTCAGCCAGAGCTCCCAACGACTTCAACCTGAAGGACTTCAATGTTGGAGATTACATCCAAGCTGTTCTGGACAGGAATCTGGCGGAGAATATTTCTCGTGTCCTCTACCCCAACGATAACTTCTTTGAGGGGAAGGAGCTACGCCTGAAGCAGGAGTACTTTGTGGTGGCGGCCACACTTCAGGACATCATCCGACGCTTCAAGATATCCAAGAAGGGCTCCACCGGTCCAGTGTCTTTCGACAGCTTCCCAGAGAAGGTGGCCATCCAGTTGAATGACACTCATCCTGCGATGGCCATCCCAGAGCTCATGAGGGTCTTTGTGGACGTCGAGAAACTCGACTGGGACACGgcGTGGGCCATCACCAAGCGGACCTTTGCGTACACCAATCACACGGTGCTTCCCGAGGCTCTGGAGCGCTGGCCCGTTGGCCTGCTGGAGACCCTGCTGCCCAGACACCTCCAGATCATCTACAGGATCAATCAGGGACACCTGGACGGGATTAGAGCTCTCTTTCCAGGAGACCTGGAAAGGATACGCAGGATGTCTCTGATCGAGGAAGACGGGGGCAAGAGGGTCAACATGGCCCACCTGTGCATCGTGGGATCTCACGCCGTCAACGGAGTCGCAGAGATACACTCCAACATCATCAAGAATGACGTGTTCCGAGACTTCAGCGAATTAGAACCGGATAAATTCCAGAACAAGACCAATGGCATCACTCCTAGGCGCTGGCTCCTCCTCTGTAACCCGGGATTGGCTGAGCTTATCGCTGAGGCCATTGGGGAGGAATATGTGAAAGACCTCAGTCAGTTACAGAAGCTCAATGAGCTGGTCAATGATGATGCCTTCATTAGAGATGTGTCTAAAGTCAAGCAGGACAACAAGGTGAAGTTTTCACAGTACCTGGAGAAAGAGTACAAGGTGAACATCAACCTGTCCTCCATGTTTGACGTCCACGTCAAGAGGATTCACGAGTACAAGCGCCAGCTCCTCAACTGCCTTCACATTATCACCATGTACAACCgCATCAAGAAGAACCCAAAAGCACTTTTTGTTCCCCGGACTGTGATCATTGGTGGCAAGGCTGCCCCAGGGTATCACatggccaagaagatcatcaagctGATCACGGCCGTCGGACATGTGGTCAACAAAGACCCAGTGGTGGGAAGCAAACTGAAGGTCATCTACCTGGAGAACTACAGAGTCTCCCTGGCTGAGAAAGTCATCCCAGCCACAGACCTGTCTGAGCAGATCTCCACAGCTGGCACGGAGGCGTCTGGCACTGGCAACATGAAGTTCATGCTGAACGGAGCGCTCACCATCGGCACCATGGACGGAGCCAACGTAGAGATGGCCGAGGAGGCTGGAGAGGAGAACATGTTCATCTTCGGCATGAGGGTGGAGGACGTGGCAGAGATGGACGTACAGGGCTACGATGCCATGACATATTACAACAACATCCCAGAACTGAAGCAGGCCGTTGACCAGATTCAGGGAGGATTCTTCAGCCCCAAACAACCAGAGCTCTTCAAAGACGTCACCAACATGCTCTTCAACCACGACCGCTTCAAGGTGTTTGCAGACTATGAGGGTTACATAAAGTGCCAGGAGAAAGTCAGCCAACTATATCAGAATCCTAAGGAGTGGACGCAGATGGCGATCAAGAATATCGCTGCTTCCGGAAAGTTCTCTAGCGACCGCACCATCACCGACTACGCCACGGAGGTGTGGGGGGTGGAGCCTACTGATCTGAAGATCCCACCCCCCAACGAGCCCCGCAAGGCCTTGGAGGAGACCGCCAGGGTGCTGACGGAGAAGTGAGGCTGCCTGGTGTGGTGTAGGGTGACAttgcccctagacgctgatcttgggtcagttttttTTCTAATGGTTGAGGGGAAGTGGATTCTAGATTTGTATCTAGGGAAACGTCACCCAGAAGCGCCTCGTGTTCTTTTTAAAGGGACAATCTGGGATTCAGACAACAACAAAGCAGTCACCACGCTacttttggtaaacagctgagggatagCCACTCCCAAATGTATAAACGCAGCTATGGAGGCAAGTCCATCTGTGAGATTGAAATGTTTTAACCATGTATTGAAATGAGtcaaatcccagattgcccctttagcTCAATAAACTGAGTTTTGTTTGTAAAACACCTTAACTGATGCAAATTAACAGTCTGCTACATACCCTCAGAATAAACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCCTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACAAACCCTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATAAACAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGTATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATACCTTCAGACTAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAATAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCTTTAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATCCACAAACAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAACAGTCTGCTACATATCTTCAGAATAAACAAACAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAAACAGTCTGCTACATACCCTCAGAATAAACAACAGTCTGCTACATACCCTCAGAATAAACAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAAT
>TU1883609
AAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACCAAATTATCAAATTTTCCTCAGCATTTCTGAATCCACCTTCTAAATACAAGGTCAAATGGCAGCCTGtccactatatagtgcactactgttgaccggACTGCTATTGGCcttggtcgaaagtagtgcactgtaaagtgaacaggggtgccatttggggaaaCTGCCCGTTAGCCAGCTACCAGTGAGTGGTCCATTCTTAGCAAAACTGTCTCATACTATATAGCGAGAGTTGAATATTTTCCATTATTAATGACccttgttttttttccccaaTGTTCTGTGTTGCatcaaaataaatatatttgtgtTTGA
>TU1883611
AAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATACCTTCAGAATCCACAAACAACAGTCTGCTACATACCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACAGTCTGCTACATATCTTCAGAATAAACAAACCAAATTATCAAATTTTCCTCAGCATTTCTGAATCCACCTTCTAAATACAAGGTCAAATGGCAGCCTGtccactatatagtgcactactgttgaccggACTGCTATTGGCcttggtcgaaagtagtgcactgtaaagtgaacaggggtgccatttggggaaaCTGCCCGTTAGCCAGCTACCAGTGAGTGGTCCATTCTTAGCAAAACTGTCTCATACTATATAGCGAGAGTTGAATATTTTCCATTATTAATGACccttgttttttttccccaaTGTTCTGTGTTGCatcaaaataaatatatttgtgtTTGA

Function

NR:

description
PREDICTED: glycogen phosphorylase, liver form

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0008184 glycogen phosphorylase activity molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955307.1 False 5333 mRNA 0.46 20 61863637 61898665
TU1883609 False 475 lncRNA 0.38 2 61898297 61899051
TU1883611 True 475 lncRNA 0.38 2 61898297 61899051

Neighbor

gene id symbol gene type direction distance location
trim9 trim9 coding upstream 10756 61746138 ~ 61852881 (+)
LOC110498259 LOC106603387 coding upstream 157494 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 434180 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 462373 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 481291 61362432 ~ 61382346 (+)
nin LOC106611458 coding downstream 25661 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 121929 62020594 ~ 62038893 (+)
map4k5 LOC106611444 coding downstream 196776 62095441 ~ 62210453 (+)
cdkl1 cdkl1 coding downstream 318438 62217103 ~ 62244281 (+)
l2hgdh l2hgdh coding downstream 350062 62248727 ~ 62273364 (+)
G1646381 NA non-coding upstream 22315 61839917 ~ 61841322 (+)
G1646379 NA non-coding upstream 27724 61829990 ~ 61835913 (+)
G1646361 NA non-coding upstream 67573 61795814 ~ 61796064 (+)
G1646345 NA non-coding upstream 103362 61755875 ~ 61760275 (+)
G1646335 NA non-coding upstream 118635 61742083 ~ 61745002 (+)
G1646394 LOC106603106 non-coding downstream 15996 61914661 ~ 61915497 (+)
G1646412 NA non-coding downstream 63986 61962651 ~ 62023734 (+)
G1646414 NA non-coding downstream 66100 61964765 ~ 61965487 (+)
G1646475 NA non-coding downstream 141680 62040345 ~ 62042161 (+)
G1646294 NA other upstream 302553 61558041 ~ 61561084 (+)
G1646225 NA other upstream 518483 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 571796 61242422 ~ 61308910 (+)
G1646089 NA other upstream 660285 61200860 ~ 61203352 (+)
G1645444 NA other upstream 1124680 60718758 ~ 60738957 (+)
G1646509 NA other downstream 245518 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 588336 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1118290 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1176484 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1304091 63202756 ~ 63204057 (+)
LOC118941521 NA coding upstream 15964 61881330 ~ 61882333 (+)
G1646390 NA non-coding upstream 3930 61893947 ~ 61894367 (+)
G1646388 NA non-coding upstream 14270 61883386 ~ 61884027 (+)

Expression


Co-expression Network