G1646361


Basic Information

Item Value
gene id G1646361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61795814 ~ 61796064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883647
ttctctctgtcctctgaccatgtttttctctctgtcctctgaccatgtttttctctctgtcctctggtcatgtttttctctctgtcctctggtcatgtttttctctctgtcctctgatcatgtttttctctctgtcctctgatcatgttttctctctgtcctctgatcatgtttttctctctgtcctctgaccatgtttttctctctgtcctctgaccatgtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883647 True 225 lncRNA 0.43 2 61795814 61796064

Neighbor

gene id symbol gene type direction distance location
LOC110498259 LOC106603387 coding upstream 89671 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 366357 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 394550 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 413468 61362432 ~ 61382346 (+)
LOC110498404 LOC105025554 coding upstream 490683 61242422 ~ 61308910 (+)
pygl LOC106611459 coding downstream 67573 61863637 ~ 61899051 (+)
LOC118941521 NA coding downstream 85266 61881330 ~ 61882333 (+)
nin LOC106611458 coding downstream 128262 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 224530 62020594 ~ 62038893 (+)
map4k5 LOC106611444 coding downstream 299377 62095441 ~ 62210453 (+)
G1646345 NA non-coding upstream 35539 61755875 ~ 61760275 (+)
G1646335 NA non-coding upstream 50812 61742083 ~ 61745002 (+)
G1646332 NA non-coding upstream 57286 61738291 ~ 61738528 (+)
G1646326 NA non-coding upstream 65653 61729877 ~ 61730161 (+)
G1646322 NA non-coding upstream 74734 61715514 ~ 61721080 (+)
G1646379 NA non-coding downstream 33926 61829990 ~ 61835913 (+)
G1646381 NA non-coding downstream 43853 61839917 ~ 61841322 (+)
G1646388 NA non-coding downstream 87322 61883386 ~ 61884027 (+)
G1646390 NA non-coding downstream 97883 61893947 ~ 61894367 (+)
G1646294 NA other upstream 234730 61558041 ~ 61561084 (+)
G1646225 NA other upstream 450660 61344787 ~ 61345154 (+)
G1646089 NA other upstream 592462 61200860 ~ 61203352 (+)
G1645444 NA other upstream 1056857 60718758 ~ 60738957 (+)
G1646509 NA other downstream 348119 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 690937 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1220891 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1279085 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1406692 63202756 ~ 63204057 (+)

Expression


Co-expression Network