Gene
RNA
| Item | Value |
|---|---|
| gene id | G1646322 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 61715514 ~ 61721080 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1883564 | False | 719 | lncRNA | 0.40 | 2 | 61715514 | 61721080 |
| TU1883566 | True | 310 | lncRNA | 0.39 | 2 | 61720196 | 61721080 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498259 | LOC106603387 | coding | upstream | 9371 | 61700705 ~ 61707803 (+) |
| LOC118941510 | LOC106603467 | coding | upstream | 286057 | 61407641 ~ 61430060 (+) |
| LOC118941509 | LOC106603467 | coding | upstream | 314250 | 61392572 ~ 61401264 (+) |
| LOC118941508 | LOC106603467 | coding | upstream | 333168 | 61362432 ~ 61382346 (+) |
| LOC110498404 | LOC105025554 | coding | upstream | 410383 | 61242422 ~ 61308910 (+) |
| trim9 | trim9 | coding | downstream | 25058 | 61746138 ~ 61852881 (+) |
| pygl | LOC106611459 | coding | downstream | 142557 | 61863637 ~ 61899051 (+) |
| LOC118941521 | NA | coding | downstream | 160250 | 61881330 ~ 61882333 (+) |
| nin | LOC106611458 | coding | downstream | 203246 | 61924326 ~ 62009301 (+) |
| sav1 | sav1 | coding | downstream | 299514 | 62020594 ~ 62038893 (+) |
| G1646320 | NA | non-coding | upstream | 3665 | 61711617 ~ 61711849 (+) |
| G1646318 | NA | non-coding | upstream | 4331 | 61710958 ~ 61711183 (+) |
| G1646317 | NA | non-coding | upstream | 5888 | 61709390 ~ 61709626 (+) |
| G1646316 | NA | non-coding | upstream | 6132 | 61709147 ~ 61709382 (+) |
| G1646326 | NA | non-coding | downstream | 8797 | 61729877 ~ 61730161 (+) |
| G1646332 | NA | non-coding | downstream | 17211 | 61738291 ~ 61738528 (+) |
| G1646335 | NA | non-coding | downstream | 21003 | 61742083 ~ 61745002 (+) |
| G1646345 | NA | non-coding | downstream | 34795 | 61755875 ~ 61760275 (+) |
| G1646361 | NA | non-coding | downstream | 74734 | 61795814 ~ 61796064 (+) |
| G1646294 | NA | other | upstream | 154430 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 370360 | 61344787 ~ 61345154 (+) |
| G1646089 | NA | other | upstream | 512162 | 61200860 ~ 61203352 (+) |
| G1645444 | NA | other | upstream | 976557 | 60718758 ~ 60738957 (+) |
| G1646509 | NA | other | downstream | 423103 | 62144183 ~ 62145290 (+) |
| srsf5a | LOC106611464 | other | downstream | 765921 | 62486921 ~ 62493719 (+) |
| G1647342 | NA | other | downstream | 1295875 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 1354069 | 63075149 ~ 63077143 (+) |
| G1647477 | NA | other | downstream | 1481676 | 63202756 ~ 63204057 (+) |
