G1646326


Basic Information

Item Value
gene id G1646326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61729877 ~ 61730161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883570
ATCAGGGCATGTTCTATTCACACCGAGGCTTGGTGGTTaactatgtggagatatgggaTCAGGGCATGTTCTATTCACACCGAGGCTTGGTGGTTaactatgtggagatatgggatcagggcatgacagtgtTCTATTCACACCGAGGCTTGGTGGTTaactatgtggagatatgggatcagagcatgacaacgTTCTATTCACACCGAGGCTTGGTGGTTaactatgtggagatatgggatcagggcatgacagtgtTCTATTCACACCGAGGCTTGGTGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883570 True 285 lncRNA 0.47 1 61729877 61730161

Neighbor

gene id symbol gene type direction distance location
LOC110498259 LOC106603387 coding upstream 23734 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 300420 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 328613 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 347531 61362432 ~ 61382346 (+)
LOC110498404 LOC105025554 coding upstream 424746 61242422 ~ 61308910 (+)
trim9 trim9 coding downstream 15977 61746138 ~ 61852881 (+)
pygl LOC106611459 coding downstream 133476 61863637 ~ 61899051 (+)
LOC118941521 NA coding downstream 151169 61881330 ~ 61882333 (+)
nin LOC106611458 coding downstream 194165 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 290433 62020594 ~ 62038893 (+)
G1646322 NA non-coding upstream 8797 61715514 ~ 61721080 (+)
G1646320 NA non-coding upstream 18028 61711617 ~ 61711849 (+)
G1646318 NA non-coding upstream 18694 61710958 ~ 61711183 (+)
G1646317 NA non-coding upstream 20251 61709390 ~ 61709626 (+)
G1646316 NA non-coding upstream 20495 61709147 ~ 61709382 (+)
G1646332 NA non-coding downstream 8130 61738291 ~ 61738528 (+)
G1646335 NA non-coding downstream 11922 61742083 ~ 61745002 (+)
G1646345 NA non-coding downstream 25714 61755875 ~ 61760275 (+)
G1646361 NA non-coding downstream 65653 61795814 ~ 61796064 (+)
G1646379 NA non-coding downstream 99829 61829990 ~ 61835913 (+)
G1646294 NA other upstream 168793 61558041 ~ 61561084 (+)
G1646225 NA other upstream 384723 61344787 ~ 61345154 (+)
G1646089 NA other upstream 526525 61200860 ~ 61203352 (+)
G1645444 NA other upstream 990920 60718758 ~ 60738957 (+)
G1646509 NA other downstream 414022 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 756840 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1286794 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1344988 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1472595 63202756 ~ 63204057 (+)

Expression


Co-expression Network