G1646317


Basic Information

Item Value
gene id G1646317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61709390 ~ 61709626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883559
acgcaggtactttcccgaaatggatgacacaaacaactggattcgttatccctttcatgccctgcctccagtccacttaccgatatctgaacaagagagactCACGGAAATTGCAACCAGCGGTTCTgttaaaatataatttaatcagaagccactgccagatttctggatttaGCTGccctcagagtatcctgccttggcaaatcacgctgttaagacactgatgccctttgcaac

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883559 True 237 lncRNA 0.46 1 61709390 61709626

Neighbor

gene id symbol gene type direction distance location
LOC110498259 LOC106603387 coding upstream 3247 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 279933 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 308126 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 327044 61362432 ~ 61382346 (+)
LOC110498404 LOC105025554 coding upstream 404259 61242422 ~ 61308910 (+)
trim9 trim9 coding downstream 36512 61746138 ~ 61852881 (+)
pygl LOC106611459 coding downstream 154011 61863637 ~ 61899051 (+)
LOC118941521 NA coding downstream 171704 61881330 ~ 61882333 (+)
nin LOC106611458 coding downstream 214700 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 310968 62020594 ~ 62038893 (+)
G1646316 NA non-coding upstream 8 61709147 ~ 61709382 (+)
G1646303 NA non-coding upstream 50318 61658381 ~ 61659072 (+)
G1646293 NA non-coding upstream 61305 61587827 ~ 61648085 (+)
G1646296 NA non-coding upstream 99033 61595114 ~ 61610357 (+)
G1646318 NA non-coding downstream 1332 61710958 ~ 61711183 (+)
G1646320 NA non-coding downstream 1991 61711617 ~ 61711849 (+)
G1646322 NA non-coding downstream 5888 61715514 ~ 61721080 (+)
G1646326 NA non-coding downstream 20251 61729877 ~ 61730161 (+)
G1646332 NA non-coding downstream 28665 61738291 ~ 61738528 (+)
G1646294 NA other upstream 148306 61558041 ~ 61561084 (+)
G1646225 NA other upstream 364236 61344787 ~ 61345154 (+)
G1646089 NA other upstream 506038 61200860 ~ 61203352 (+)
G1645444 NA other upstream 970433 60718758 ~ 60738957 (+)
G1646509 NA other downstream 434557 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 777375 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1307329 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1365523 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1493130 63202756 ~ 63204057 (+)

Expression


Co-expression Network