G1646303


Basic Information

Item Value
gene id G1646303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61658381 ~ 61659072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883531
GGAAGTatcctttaaaaaataaaaataaatacataaaaataatcTTAGTTTACGGTAGAATAACTCCCTGTTCAAAAAATGAACATATTGGTAAGAGTAAGGCAGGTCTGGATACAGTCTCTAAATCTTTCCACAAAAAAAGGAACATATTGGTAAGAGTAAGACAGGTCTGGGTACAGTCTCTAAATCTTTCCACAAAAAAAGGAACATATTGGTAAGAGTAAGGCAGGTCTGGATACAGTCTCTAAATCTTTCCACAAAAAAAGGAACATATTGGTAACAGTAAGGCAGGTCTGGATACAGTCTCTAAATCTTTCCACAAAAAAAGGAACATATTGGTAACAGTAAGACAGGTCTGGATACAGTCTCTAAATCTTTCCACAAAAAAGGAACATATTGGTAACAGTAAGGCAGGTCTGGATACAGTCTCTAAATCTTTCCACAAAAAAAGGAACATATTGGTAACAGTAAGGCAGGTCTGGATACAGTCTCTAAATCTttccaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106599425 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883531 True 506 lncRNA 0.35 3 61658381 61659072

Neighbor

gene id symbol gene type direction distance location
LOC118941510 LOC106603467 coding upstream 228924 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 257117 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 276035 61362432 ~ 61382346 (+)
LOC110498404 LOC105025554 coding upstream 353250 61242422 ~ 61308910 (+)
xdh xdh coding upstream 721184 60888364 ~ 60937197 (+)
LOC110498259 LOC106603387 coding downstream 41633 61700705 ~ 61707803 (+)
trim9 trim9 coding downstream 87066 61746138 ~ 61852881 (+)
pygl LOC106611459 coding downstream 204565 61863637 ~ 61899051 (+)
LOC118941521 NA coding downstream 222258 61881330 ~ 61882333 (+)
nin LOC106611458 coding downstream 265254 61924326 ~ 62009301 (+)
G1646293 NA non-coding upstream 10296 61587827 ~ 61648085 (+)
G1646296 NA non-coding upstream 48024 61595114 ~ 61610357 (+)
G1646247 NA non-coding upstream 58418 61566374 ~ 61599963 (+)
G1646236 NA non-coding upstream 59893 61503253 ~ 61598488 (+)
G1646295 NA non-coding upstream 78661 61562800 ~ 61579720 (+)
G1646316 NA non-coding downstream 50075 61709147 ~ 61709382 (+)
G1646317 NA non-coding downstream 50318 61709390 ~ 61709626 (+)
G1646318 NA non-coding downstream 51886 61710958 ~ 61711183 (+)
G1646320 NA non-coding downstream 52545 61711617 ~ 61711849 (+)
G1646294 NA other upstream 97297 61558041 ~ 61561084 (+)
G1646225 NA other upstream 313227 61344787 ~ 61345154 (+)
G1646089 NA other upstream 455029 61200860 ~ 61203352 (+)
G1645444 NA other upstream 919424 60718758 ~ 60738957 (+)
G1646509 NA other downstream 485111 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 827929 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1357883 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1416077 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1543684 63202756 ~ 63204057 (+)

Expression


Co-expression Network