G1646332


Basic Information

Item Value
gene id G1646332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61738291 ~ 61738528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1883576
CTCTGTTGCTCTGTTGATCTTTCCCTCGAttgtgactagtctcccagtccctgccgctgaaaaacatccccatagcatgatgctaccaccagtgtgctttaccgtagggatggtgccaggtttcctccagacgtgatgcttggcattcaggccaaaaagttcaatcttggtttcatcagaccagagaatcgtgtttttcatggtctgagagtctttaggtgccttttggcaaactcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1883576 True 238 lncRNA 0.48 1 61738291 61738528

Neighbor

gene id symbol gene type direction distance location
LOC110498259 LOC106603387 coding upstream 32148 61700705 ~ 61707803 (+)
LOC118941510 LOC106603467 coding upstream 308834 61407641 ~ 61430060 (+)
LOC118941509 LOC106603467 coding upstream 337027 61392572 ~ 61401264 (+)
LOC118941508 LOC106603467 coding upstream 355945 61362432 ~ 61382346 (+)
LOC110498404 LOC105025554 coding upstream 433160 61242422 ~ 61308910 (+)
trim9 trim9 coding downstream 7610 61746138 ~ 61852881 (+)
pygl LOC106611459 coding downstream 125109 61863637 ~ 61899051 (+)
LOC118941521 NA coding downstream 142802 61881330 ~ 61882333 (+)
nin LOC106611458 coding downstream 185798 61924326 ~ 62009301 (+)
sav1 sav1 coding downstream 282066 62020594 ~ 62038893 (+)
G1646326 NA non-coding upstream 8130 61729877 ~ 61730161 (+)
G1646322 NA non-coding upstream 17211 61715514 ~ 61721080 (+)
G1646320 NA non-coding upstream 26442 61711617 ~ 61711849 (+)
G1646318 NA non-coding upstream 27108 61710958 ~ 61711183 (+)
G1646317 NA non-coding upstream 28665 61709390 ~ 61709626 (+)
G1646335 NA non-coding downstream 3555 61742083 ~ 61745002 (+)
G1646345 NA non-coding downstream 17347 61755875 ~ 61760275 (+)
G1646361 NA non-coding downstream 57286 61795814 ~ 61796064 (+)
G1646379 NA non-coding downstream 91462 61829990 ~ 61835913 (+)
G1646381 NA non-coding downstream 101389 61839917 ~ 61841322 (+)
G1646294 NA other upstream 177207 61558041 ~ 61561084 (+)
G1646225 NA other upstream 393137 61344787 ~ 61345154 (+)
G1646089 NA other upstream 534939 61200860 ~ 61203352 (+)
G1645444 NA other upstream 999334 60718758 ~ 60738957 (+)
G1646509 NA other downstream 405655 62144183 ~ 62145290 (+)
srsf5a LOC106611464 other downstream 748473 62486921 ~ 62493719 (+)
G1647342 NA other downstream 1278427 63016955 ~ 63018688 (+)
G1647411 NA other downstream 1336621 63075149 ~ 63077143 (+)
G1647477 NA other downstream 1464228 63202756 ~ 63204057 (+)

Expression


Co-expression Network