G1647240


Basic Information

Item Value
gene id G1647240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 62638505 ~ 62681392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1884780
cacttaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaatacatttcacatgctgttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcagaccacttctcagttcctatgcttcctggctgatgttttggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1884780 True 217 lncRNA 0.41 2 62638505 62681392

Neighbor

gene id symbol gene type direction distance location
LOC110504278 LOC102780996 coding upstream 379 62604904 ~ 62638126 (+)
LOC110504279 LOC106599953 coding upstream 35731 62500076 ~ 62602774 (+)
srsf5a LOC106611464 coding upstream 144867 62486921 ~ 62493719 (+)
LOC110504280 LOC106602928 coding upstream 153058 62466254 ~ 62485447 (+)
LOC118941522 LOC106591813 coding upstream 178198 62455117 ~ 62460307 (+)
LOC100136022 NA coding downstream 204191 62885583 ~ 63042917 (+)
map3k9 map3k9 coding downstream 369425 63050817 ~ 63103044 (+)
med6 med6 coding downstream 460031 63141423 ~ 63152629 (+)
pcnx1 pcnx1 coding downstream 471961 63153353 ~ 63232158 (+)
LOC110498282 NA coding downstream 567230 63248622 ~ 63287372 (+)
G1646666 NA non-coding upstream 24309 62613513 ~ 62614196 (+)
G1646446 NA non-coding upstream 34553 62602942 ~ 62603952 (+)
G1646650 NA non-coding upstream 75729 62561766 ~ 62562776 (+)
G1646649 NA non-coding upstream 77702 62560206 ~ 62560803 (+)
G1647261 NA non-coding downstream 4297 62685689 ~ 62686442 (+)
G1647262 NA non-coding downstream 4575 62685967 ~ 62686917 (+)
G1647265 NA non-coding downstream 18400 62699792 ~ 62700061 (+)
G1647268 NA non-coding downstream 22586 62703978 ~ 62725980 (+)
G1647269 NA non-coding downstream 33879 62715271 ~ 62715837 (+)
G1646509 NA other upstream 493215 62144183 ~ 62145290 (+)
G1646294 NA other upstream 1077421 61558041 ~ 61561084 (+)
G1646225 NA other upstream 1293351 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 1346664 61242422 ~ 61308910 (+)
G1647342 NA other downstream 335563 63016955 ~ 63018688 (+)
G1647411 NA other downstream 393757 63075149 ~ 63077143 (+)
G1647477 NA other downstream 521364 63202756 ~ 63204057 (+)
LOC110498409 LOC106592792 other downstream 710233 63380908 ~ 63414582 (+)
G1648296 NA other downstream 1446816 64128208 ~ 64129068 (+)

Expression


Co-expression Network