Gene
RNA
| Item | Value |
|---|---|
| gene id | G1647261 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 62685689 ~ 62686442 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1884805 | True | 241 | lncRNA | 0.47 | 2 | 62685689 | 62686442 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504278 | LOC102780996 | coding | upstream | 47563 | 62604904 ~ 62638126 (+) |
| LOC110504279 | LOC106599953 | coding | upstream | 82915 | 62500076 ~ 62602774 (+) |
| srsf5a | LOC106611464 | coding | upstream | 192051 | 62486921 ~ 62493719 (+) |
| LOC110504280 | LOC106602928 | coding | upstream | 200242 | 62466254 ~ 62485447 (+) |
| LOC118941522 | LOC106591813 | coding | upstream | 225382 | 62455117 ~ 62460307 (+) |
| LOC100136022 | NA | coding | downstream | 199141 | 62885583 ~ 63042917 (+) |
| map3k9 | map3k9 | coding | downstream | 364375 | 63050817 ~ 63103044 (+) |
| med6 | med6 | coding | downstream | 454981 | 63141423 ~ 63152629 (+) |
| pcnx1 | pcnx1 | coding | downstream | 466911 | 63153353 ~ 63232158 (+) |
| LOC110498282 | NA | coding | downstream | 562180 | 63248622 ~ 63287372 (+) |
| G1647240 | NA | non-coding | upstream | 4297 | 62638505 ~ 62681392 (+) |
| G1646666 | NA | non-coding | upstream | 71493 | 62613513 ~ 62614196 (+) |
| G1646446 | NA | non-coding | upstream | 81737 | 62602942 ~ 62603952 (+) |
| G1646650 | NA | non-coding | upstream | 122913 | 62561766 ~ 62562776 (+) |
| G1647265 | NA | non-coding | downstream | 13350 | 62699792 ~ 62700061 (+) |
| G1647268 | NA | non-coding | downstream | 17536 | 62703978 ~ 62725980 (+) |
| G1647269 | NA | non-coding | downstream | 28829 | 62715271 ~ 62715837 (+) |
| G1647273 | NA | non-coding | downstream | 43034 | 62729476 ~ 62730083 (+) |
| G1647274 | NA | non-coding | downstream | 53218 | 62739660 ~ 62740113 (+) |
| G1646509 | NA | other | upstream | 540399 | 62144183 ~ 62145290 (+) |
| G1646294 | NA | other | upstream | 1124605 | 61558041 ~ 61561084 (+) |
| G1646225 | NA | other | upstream | 1340535 | 61344787 ~ 61345154 (+) |
| LOC110498404 | LOC105025554 | other | upstream | 1393848 | 61242422 ~ 61308910 (+) |
| G1647342 | NA | other | downstream | 330513 | 63016955 ~ 63018688 (+) |
| G1647411 | NA | other | downstream | 388707 | 63075149 ~ 63077143 (+) |
| G1647477 | NA | other | downstream | 516314 | 63202756 ~ 63204057 (+) |
| LOC110498409 | LOC106592792 | other | downstream | 705183 | 63380908 ~ 63414582 (+) |
| G1648296 | NA | other | downstream | 1441766 | 64128208 ~ 64129068 (+) |
