G1647265


Basic Information

Item Value
gene id G1647265
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 62699792 ~ 62700061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1884810
acacagaacacagaacacagaacacagaacacagagcacagaacacagagcacagaacacagaacacagaacacagaacacagaacacagaacacagagcacagagcacagagcacagaacacagagcacagaacacagagcacagaacacagagcacagagcacagaacacagagcacagaacacagagcacagaacacagagcacagaacacagagcacagaacacagagcacagaacacagaacac

Function

NR:

description
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 4 regulatory subunit 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1884810 True 249 lncRNA 0.49 2 62699792 62700061

Neighbor

gene id symbol gene type direction distance location
LOC110504278 LOC102780996 coding upstream 61666 62604904 ~ 62638126 (+)
LOC110504279 LOC106599953 coding upstream 97018 62500076 ~ 62602774 (+)
srsf5a LOC106611464 coding upstream 206154 62486921 ~ 62493719 (+)
LOC110504280 LOC106602928 coding upstream 214345 62466254 ~ 62485447 (+)
LOC118941522 LOC106591813 coding upstream 239485 62455117 ~ 62460307 (+)
LOC100136022 NA coding downstream 185522 62885583 ~ 63042917 (+)
map3k9 map3k9 coding downstream 350756 63050817 ~ 63103044 (+)
med6 med6 coding downstream 441362 63141423 ~ 63152629 (+)
pcnx1 pcnx1 coding downstream 453292 63153353 ~ 63232158 (+)
LOC110498282 NA coding downstream 548561 63248622 ~ 63287372 (+)
G1647262 NA non-coding upstream 12875 62685967 ~ 62686917 (+)
G1647261 NA non-coding upstream 13350 62685689 ~ 62686442 (+)
G1647240 NA non-coding upstream 18400 62638505 ~ 62681392 (+)
G1646666 NA non-coding upstream 85596 62613513 ~ 62614196 (+)
G1647268 NA non-coding downstream 3917 62703978 ~ 62725980 (+)
G1647269 NA non-coding downstream 15210 62715271 ~ 62715837 (+)
G1647273 NA non-coding downstream 29415 62729476 ~ 62730083 (+)
G1647274 NA non-coding downstream 39599 62739660 ~ 62740113 (+)
G1647275 NA non-coding downstream 46433 62746494 ~ 62748632 (+)
G1646509 NA other upstream 554502 62144183 ~ 62145290 (+)
G1646294 NA other upstream 1138708 61558041 ~ 61561084 (+)
G1646225 NA other upstream 1354638 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 1407951 61242422 ~ 61308910 (+)
G1647342 NA other downstream 316894 63016955 ~ 63018688 (+)
G1647411 NA other downstream 375088 63075149 ~ 63077143 (+)
G1647477 NA other downstream 502695 63202756 ~ 63204057 (+)
LOC110498409 LOC106592792 other downstream 691564 63380908 ~ 63414582 (+)
G1648296 NA other downstream 1428147 64128208 ~ 64129068 (+)

Expression


Co-expression Network