G1647543


Basic Information

Item Value
gene id G1647543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63500950 ~ 63501200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885153
CATTTTGTCATGGTGCCCCCCTCAGATGCACAACGGATTTAATAACAAGATACATTTCCATagaatattgtctttgtgtttcATTTTAAAACGTTTGCCATGAACAGAACTCGTCAccataaaacaaaaacaaaaatggtggtcagttttgtattttgtgtttttgtCTAAAAGTCTTTGGTAGATTTCATTAATTCCTATTCAGTAACAACCTGTGAGTTCTACAAGTGAGCCGAGGCAGTCAAATAAAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885153 True 251 lncRNA 0.35 1 63500950 63501200

Neighbor

gene id symbol gene type direction distance location
fbln5 fbln5 coding upstream 778 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 86368 63380908 ~ 63414582 (+)
rtf1 rtf1 coding upstream 128615 63348949 ~ 63372335 (+)
LOC110498286 NA coding upstream 154658 63339785 ~ 63346292 (+)
LOC110498285 NA coding upstream 184134 63312561 ~ 63320421 (+)
LOC110498294 LOC106599381 coding downstream 5586 63506786 ~ 63534703 (+)
plek2 plek2 coding downstream 56603 63557803 ~ 63565484 (+)
LOC110514319 rbm25 coding downstream 147169 63648369 ~ 63719010 (+)
ccdc177 LOC106586969 coding downstream 692309 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 701020 64202220 ~ 64215617 (+)
G1647542 NA non-coding upstream 84 63500422 ~ 63500866 (+)
G1647551 NA non-coding upstream 5566 63465665 ~ 63495384 (+)
G1647554 NA non-coding upstream 15173 63484960 ~ 63485777 (+)
G1647553 NA non-coding upstream 15992 63484494 ~ 63484958 (+)
G1647550 NA non-coding upstream 36797 63463654 ~ 63464153 (+)
G1647558 NA non-coding downstream 676 63501876 ~ 63502138 (+)
G1647573 NA non-coding downstream 37273 63538473 ~ 63539065 (+)
G1647589 NA non-coding downstream 51641 63552841 ~ 63556107 (+)
G1647592 NA non-coding downstream 65793 63566993 ~ 63567963 (+)
G1647593 NA non-coding downstream 67527 63568727 ~ 63570341 (+)
G1647477 NA other upstream 296893 63202756 ~ 63204057 (+)
G1647411 NA other upstream 423807 63075149 ~ 63077143 (+)
G1647342 NA other upstream 482262 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1007231 62486921 ~ 62493719 (+)
G1648296 NA other downstream 627008 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1479164 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1960573 65461773 ~ 65463454 (+)
G1649291 NA other downstream 2043177 65544377 ~ 65545055 (+)
G1649309 NA other downstream 2077239 65578439 ~ 65582582 (+)

Expression


Co-expression Network