XLOC_003916 (pimr204)


Basic Information

Item Value
gene id XLOC_003916
gene name pimr204
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8221835 ~ 8271374 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007500
GGACTGTTCCGTCTCTGGTACACTTTAAATCCAGATCCAGAGCTGTTTTCTAGAGCACCTGGGGTCAGGAACACTGTTGATTTAGATCCAGAGCCTGCCCCTGGAGTGCATGGTCTCCGGAACTCTGTTGATCCAGATCCAGAAAATGTACCTGGAATGTCTAAGCCCTGGAGTACTGTTTATTCTGATCCAGTGCCTATACCTGAAGTATCCAGGAACCGGAATACTGTTGATCTTGATCCAGATCAAGAGCCTGTACTTGGACTGTCTTGGCTTTGGTACACTTTTGTTCCTGAGCTAGAGTTTGCCCTTGGACGGAATCGTCTCAGAGCCTGTTTAAATCCAGATCCAGACCCCGTTGCTGGACCATCTGTAGTTCAGAACATGGTTGATCAGGAATCGGAGCCTGTGCCTGGACCATCTAGTCTCCAAGACACGTCCAATGCGAGGTCCTCATCTGCCTCAGGAGCCCCTAATTTTGAGCCAAATACTGgaTCTTTGACTGGTCTCTACGGCTTTGGAGAAATGATAGGATCTGGGAGCTTTGGCTCAACATACAAAGCAGTTCGTAAATCTGATGGCAAGCAGGTTGCCATCAAGAAGATTCCGAAGAGAAGCAATCCACGTTACATCTCTGTTCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCAAATGCTGAAACATCCTTCAGCAAGCAAGCATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACAGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTATTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCATCTTGGCAAACATCCGGACCATAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCaacaaaaaatgttcaaaaaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGAcatttgttaagctgctttgacaacaTCTGCATTGTATAAGTTttgtaaataaagatgaattgacaTGTA
>TCONS_00007501
tagcaactgataTCTGCAGGAAGGTGACTCTCCAGGAACAGTGCTGGCCACCCCTGCCCTATACCCTCATCTACTACTCCTTACGTTAGTCTAGTAAATTAGTGTATTTAAATGAGGGAATGTAAACAAATAAGTCAATTGAAgcagttttgtttgtgcttttctGGTTGATAAACCCCTCAGATGGATTGGATTCTGCTTGGTTAGACCCAAGTTATTTAACACAACAAGCTGTATGCTAGTAATGAAACACTGTAGTTTTATTTGTCATGTATAGGaatgttatttttacaattaaataaatgtatttattaattcatttaaggGTACAGGGCTGCGATATCAGATATAGCCATTGGTTAACTTGCTTTAGAAGTGTTTGATTAGAGTTtaagcaaaactctgcaggacacagaCCCTCCAGGACTCTCCAGTAGccttttttaataacaaatttcagAAGATATCTTTATAAATGTCAGCTTTAATGTCTTATACTGTCTTGATTAACTATCTCTTTCTCCTTGTACAGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCaacaaaaaatgttcaaaaaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGAcatttgttaagctgctttgacaacaTCTGCAT
>TCONS_00007502
ctttttctctgcaGCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCTAATGCTGAAACATCCTTCAGCAAGCAAACATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTAGTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCGTCTTGGCAAACATCCGGACCGTAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGTAAATACAACTGATCCAGTAGGAAACAACTTTTCTAATACTGGCACACACAAAGCTGATGATGTCACGTtagttttagatttttcattaatCATCTTCACTTTTGCTAATGTGTAACATATTTAAGTGCACTTAAAACTCAAGTATTAAACATGTTTAGCAATAccgttaataaaaaaaaacacatattaa
>TCONS_00007505
ctttttctctgcaGCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCTAATGCTGAAACATCCTTCAGCAAGCAAACATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTAGTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCGTCTTGGCAAACATCCGGACCGTAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCTGGGATCTGATAGAAAAGTGCATGGATAAAAAATTGTCAACGTTGGAGGAAGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTcaacaaaaaatcattaaaaaatcatCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGAACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGACATTtgataagctgctttgacaacaTTTGCATTGTATAAGTTttgtaaataaagatgaattgacaTGTACATATCagaaataagatttatttttgcactgtttatgtatatattagagtatattatgtgtatgtttatttatttagttgtacaGTTTGCACGTTTACACTTTATGCTGTTTAtgacactactggtcaaaagtttggcgGTGGGGGGTGttaaagaaaatgattctgtaaatattgatttattacttattgtatgtagttgcAAATGAAATCATTGATCCagtcatttttgcttttattactgtTACCATTAATAGGATCaagtgactctgaagactggagtaatgatgctgaaaattcatctttaaaattactgtaataaatgattaaattaaatgatcaaatacattttaacagttattttatagtggaataacatttcacaattcgtactgcatttttaatgaaacacagccttggtgagcaggagaagcttattttaaaacatttaaacattttactgaGCCCAAACTTTTGCCCGGCGGTGTATAGaggtatttatatgtatttatttttccatatatttatgtataacattttattattgaaaGCAAAGAACTTGATTGAACAGGGAATCTTGTTTtctactgtgcacatgacaacaTAAAATGAAGCGAGG
>TCONS_00007506
ctttttctctgcaGCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCTAATGCTGAAACATCCTTCAGCAAGCAAACATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTAGTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCGTCTTGGCAAACATCCGGACCGTAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCCAAATCTTCaacaaaaaatgttcaaaaaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGAcatttgttaagctgctttgacaacaTTTGCATTGTATGAGTTttgtaaataaagatgaattgacaTGTACATATCagaaataagatttatttttgcactgtttatgtatatattagagtatattatgtgtatgtttatttatttagatatacaGTTTGCACTTTTGCACTTTATGCTGTTTAtgacactactggtcaaaagtttggcgGTGGGGGGTGTTAAAGAAAATGatcctgtaaatatttatttattacttattgtatgtagttgcAAATGAAATCATTGATCCagtcatttttgcttttattactgtTACCATTAATAGGATCaagtgactctgaagactggagtaatgatgctgaaaattcatctttaaaattactggaataaatgattaaattaaatgatcaaatacattttaacagttattttatattggaataacatttcacaatttgtactgcATTTTTGATGAAACAGcctggtgagcaggagaagcttattttaaaacatttaaacattttactgaccccaaacttttgccCGGCGGTGTATAGaggtatttatatgtatttatttttccatatatttatgtataacattttattattgaaaGCAAAGAACTTGATTGAACAGGGAATCTTGTTTtctactgtgcacatgacaacaTAAAATGAAGCGAG
>TCONS_00007507
GGACTTTTCCGTCTCTGGTACACTTTAAATCCAGATCCAGAGCTGTTTTCTAGAGCACCTGGGGTCAGGAACACTGTTGATTTAGATCCAGAGCCTGCCCCTGGAGTGCATGGTCTCCGGAACTCTGTTGATCCAGATCCAGAAAATGTACCTGGAATGTCTAAGCCCTGGAGTACTGTTTATTCTGATCCAGTGCCTGTACCTGAAGTATCCAGGAACCGGAATACTGTTGATCTTGATCCAGATCAAGAGCCTGTACTTGGACTGTCTTGGCTTTGGTACACTTTTGTTCCTGAGCTAGAGTTTGCCCTTGGACGGAATCGTCTCAGAGCCTGTTTAAATCCAGATCCAGACCACGTTGCTGGACCATCTGTAGTTCAGAACATGGTAGATCAGGAACCAGAGCCTGTGCCTGGACCATCTAGTCTCCAAGACACGTCCAATGCGAGGTCCTCATCTGCCTCAGGAGCCCCTAATTTTGAGCCAAATACTGgaTCTTTGACTGGTCTCTACGGCTTTGGAGAAATGATAGGATCTGGGAGCTTTGGCTCAACATACAAAGCAGTTCGTAAATCTGATGGCAAGCAGgttGCCATCAAGAAGATTCCGAAGAGAAAGAATCCAAGTTACATCTCTGTTCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCTAATGCTGAAACATCCTTCAGCAAGCAAACATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTAGTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCGTCTTGGCAAACATCCGGACCGTAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCCAAATCTTCaacaaaaaatgttcaaaaaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGAcatttgttaagctgctttgacaacaTTTGCATTGTATGAGTTttgtaaataaagatgaattgacaTGTA
>TCONS_00007508
tagcaactgataTCTGCAGGAAGGTGACTCTCCAGGAACAGTGCTGGCCACCCCTGCCCTATACCCTCATCTACTACTCCTTACGTTAGTCTAGTAAATTAGTGTATTTAAAGGAGTGAATGTACACAAATAAGTCAATTGAAgcagttttgtttgtgcttttctGGTTGATAAACCCCTCAGATGGATTGGATTCTGCTTGGTTAGACCCAAGTTATTTAACACAACAAGCTGTATGCTAGTAATGAAACACTGTAGTTTTATTTGTCATGTATAGGaatgttatttttacaattaaataaatgtatttattaattcatttaaggGTACAGGGCTGCGATATCAGATATAGCCATTGGTTAACTTGCTTTAGAAGTGTTTGATTAGAGTTtaagcaaaactctgcaggacacagaCCCTCCAGGACTCTCCAGTAGccttttttaataacaaatttcagAAGATATCTTTATAAATGTCAGCTTTAATGTCTTATACAGTCTTGATTAACTATCTCTTTCTCCTTGTACAGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCCAAATCTTCaacaaaaaatgttcaaaaaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGAcatttgttaagctgctttgacaacaT

Function

symbol description
pimr204 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within negative regulation of apoptotic process and protein phosphorylation.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115884 ENSDARG00000116762

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007500 False 1526 mRNA 0.46 6 8221835 8226088
TCONS_00007501 False 889 lncRNA 0.39 2 8221872 8223052
TCONS_00007502 False 808 mRNA 0.43 2 8222220 8269227
TCONS_00007505 False 1516 mRNA 0.38 3 8256292 8269227
TCONS_00007506 False 1515 mRNA 0.38 3 8266504 8269227
TCONS_00007507 False 1526 mRNA 0.46 6 8267118 8271374
TCONS_00007508 True 883 lncRNA 0.39 2 8267161 8268336

Neighbor

gene id symbol gene type direction distance location
XLOC_003915 pimr203 coding downstream 13371 8201842 ~ 8208464 (-)
XLOC_003914 uox coding downstream 53824 8160894 ~ 8168011 (-)
XLOC_003913 ttll7 coding downstream 95572 7981243 ~ 8126263 (-)
XLOC_003912 NA coding downstream 425503 7773832 ~ 7796332 (-)
XLOC_003911 adgrl4 coding downstream 810399 7383177 ~ 7411436 (-)
XLOC_003918 pimr202 coding upstream 13312 8284686 ~ 8288925 (-)
XLOC_003919 si:ch211-247n2.1 coding upstream 32567 8303941 ~ 8350945 (-)
XLOC_003920 CR847563.2 coding upstream 205587 8476961 ~ 8515750 (-)
XLOC_003921 si:ch211-51h4.2 coding upstream 364411 8635785 ~ 8782871 (-)
XLOC_003922 NA coding upstream 712277 8983651 ~ 9523184 (-)
XLOC_003938 BX324177.10 misc upstream 3067430 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 3096220 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 3099081 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 3109530 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 3112459 11383833 ~ 11384130 (-)
XLOC_003908 NA non-coding downstream 872338 7345800 ~ 7349497 (-)
XLOC_003904 CR925817.2 non-coding downstream 1105472 7116247 ~ 7116363 (-)
XLOC_003895 NA non-coding downstream 1421897 6792546 ~ 6799938 (-)
XLOC_003894 BX936438.1 non-coding downstream 1439759 6780708 ~ 6782076 (-)
XLOC_003923 CR788237.2 non-coding upstream 1014449 9285823 ~ 9286476 (-)
XLOC_003924 CR788237.1 non-coding upstream 1020907 9292281 ~ 9293411 (-)
XLOC_003925 NA non-coding upstream 1136297 9407671 ~ 9408005 (-)

Expression


Co-expression Network