XLOC_003914 (uox)


Basic Information

Item Value
gene id XLOC_003914
gene name uox
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8160894 ~ 8168011 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007495
GGTTATCAGCAAATCACCACCTCTTTGCATGGTTGTGGAGGTGGGACAGATCACTGAACATTTGGACCAATTAAAAACACGATAACTAGTATGTGACGCCACCTCTTTAGCAAAACCCTTTGCTCTATCCAAAATCTCCTCCAATCACTGGTGCAGTCAGCGGTGACTCCTGAAACAGGCATGGCCACTACCTCAAATCAGAATGTGGAGTTCGTGAGAACCGGCTATGGAAAGAATATGGTTAAAGTTCTTCACATCCGGCGTGAAGGGAACCATCACCATATTATTGAGCTGATTGCAAACGTTCAGTTAACCCTTAAGACCCGCAAAGACTATCTAACAGGAGACAACTCTGACATCATCCCCACTGACACCGTCAAAAACACCGTCCACGCTCTTGCCAAACTAAAAGGGATTAAAAGCATTGAGAGCTTTGCACTGGATatctgtgaacatttcctcacagCGTTCAATCATGTCACAAGAGTGAAGGTCAACATTGATGAAGTTCCCTGGAAAAGACTGGAAAAGaatggAGTTGAGCACAACCATGCTTTCATCCACTGCCCTGAGGCTTTGCGCTTCTGTGAAGCCGAACAATATCTGAGTAAGACTCCAGTGGTTCACAGTGGTCTAAAAGACATGAAGGTATTGAAGACTACACAAACTGGATTTGAGGGCTTTTTGCGAGATCGTTTCACCACTCTGACTGATGCAAAAGACAGATTCTTCTGTACTTCTGTCTATGCAAGATGGCGCTACAACACGATAAATGTGGCATTTGACGCTGCATGGAAAGCTGTTAAGGACACCGTCATTCAAAAGTTTGCAGGACCCTACGATCGTGGGGAGTACTCTCCTTCTGTTCAGAAAACTCTCTATGATACACAACTCCTGGTACTTGACAGAATTCCAGAGGTTGAGGAAATTGAGATAATTATGCCGAACCAGCATTATTTTGTCATCGACATGACAAAAATAGGACTCTCGAACAAGGATGAGGTTTATCTTCCTCTTGATAATCCATCAGGAAACATCACAGGCACTGTGTGCAGAAAACCACGAGCCAGAATGTGAAGACAAGCAACCTTCACGAACCAGACATCTCATGTACACAAATCAAATAAAGTATATGATGCAA
>TCONS_00007496
TCCAATCACTGGTGCAGTCAGCGGTGACTCCTGAAACAGGCATGGCCACTACCTCAAATCAGAATGTGGAGTTCGTGAGAACCGGCTATGGAAAGAATATGGTTAAAGTTCTTCACATCCGGCGTGAAGGGAACCATCACCATATTATTGAGCTGATTGCAAACGTTCAGTTAACCCTTAAGACCCGCAAAGACTATCTAACAGGAGACAACTCTGACATCATCCCCACTGACACCGTCAAAAACACCGTCCACGCTCTTGCCAAACTAAAAGGGATTAAAAGCATTGAGAGCTTTGCACTGGATatctgtgaacatttcctcacagCGTTCAATCATGTCACAAGAGTGAAGGTCAACATTGATGAAGTTCCCTGGAAAAGACTGGAAAAGaatggAGTTGAGCACAACCATGCTTTCATCCACTGCCCTGAGGCTTTGCGCTTCTGTGAAGCCGAACAATATCTGAGTAAGACTCCAGTGGTTCACAGTGGTCTAAAAGACATGAAGGTATTGAAGACTACACAAACTGGATTTGAGGGCTTTTTGCGAGATCGTTTCACCACTCTGACTGATGCAAAAGACAGATTCTTCTGTACTTCTGTCTATGCAAGATGGCGCTACAACACGATAAATGTGGCATTTGACGCTGCATGGAAAGCTGTTAAGGACACCGTCATTCAAAAGTTTGCAGGACCCTACGATCGTGGGGAGTACTCTCCTTCTGTTCAGAAAACTCTCTATGATACACAACTCCTGGTACTTGACAGAATTCCAGAGGTTGAGGAAATTGAGATAATTATGCCGAACCAGCATTATTTTGTCATCGACATGACAAAAATAGGACTCTCGAACAAGGATGAGGAAACATCACAGGCACTGTGTGCAGAAAACCACGAGCCAGAATGTGAAGACAAGCAACCTTCACGAACCAGACATCTCATGTACACAAATCAA
>TCONS_00007497
GACTTTTCATTAAATGTTATGGACACGTTATCAGACTCTCTTTCAAAAAAGAAACATTTCAGCTGCATTGACATTTACTAATGTGTTTCATCTAGAATGTGGAGTTCGTGAGAACCGGCTATGGAAAGAATATGGTTAAAGTTCTTCACATCCGGCGTGAAGGGAACCATCACCATATTATTGAGCTGATTGCAAACGTTCAGTTAACCCTTAAGACCCGCAAAGACTATCTAACAGGAGACAACTCTGACATCATCCCCACTGACACCGTCAAAAACACCGTCCACGCTCTTGCCAAACTAAAAGGGATTAAAAGCATTGAGAGCTTTGCACTGGATatctgtgaacatttcctcacagCGTTCAATCATGTCACAAGAGTGAAGGTCAACATTGATGAAGTTCCCTGGAAAAGACTGGAAAAGaatggAGTTGAGCACAACCATGCTTTCATCCACTGCCCTGAGGCTTTGCGCTTCTGTGAAGCCGAACAATATCTGAGTAAGACTCCAGTGGTTCACAGTGGTCTAAAAGACATGAAGGTATTGAAGACTACACAAACTGGATTTGAGGGCTTTTTGCGAGATCGTTTCACCACTCTGACTGATGCAAAAGACAGATTCTTCTGTACTTCTGTCTATGCAAGATGGCGCTACAACACGATAAATGTGGCATTTGACGCTGCATGGAAAGCTGTTAAGGACACCGTCATTCAAAAGTTTGCAGGACCCTACGATCGTGGGGAGTACTCTCCTTCTGTTCAGAAAACTCTCTATGATACACAACTCCTGGTACTTGACAGAATTCCAGAGGTTGAGGAAATTGAGATAATTATGCCGAACCAGCATTATTTTGTCATCGACATGACAAAAATA

Function

symbol description
uox Enables urate oxidase activity. Involved in urate catabolic process. Acts upstream of or within protein homotetramerization. Predicted to be located in peroxisome. Is expressed in liver and periderm. Orthologous to human UOX (urate oxidase (pseudogene)).

GO:

id name namespace
GO:0006144 purine nucleobase metabolic process biological_process
GO:0019628 urate catabolic process biological_process
GO:0051289 protein homotetramerization biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005777 peroxisome cellular_component
GO:0016491 oxidoreductase activity molecular_function
GO:0004846 urate oxidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030826-24 Enables urate oxidase activity. Involved in urate catabolic process. Acts upstream of or within protein homotetramerization. Predicted to be located in peroxisome. Is expressed in liver and periderm. Orthologous to human UOX (urate oxidase (pseudogene)).

Ensembl:

ensembl_id ENSDARG00000007024

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007495 False 1141 mRNA 0.44 8 8160894 8168011
TCONS_00007496 False 956 mRNA 0.44 8 8160912 8167872
TCONS_00007497 True 875 mRNA 0.42 6 8161313 8167799

Neighbor

gene id symbol gene type direction distance location
XLOC_003913 ttll7 coding downstream 34631 7981243 ~ 8126263 (-)
XLOC_003912 NA coding downstream 364562 7773832 ~ 7796332 (-)
XLOC_003911 adgrl4 coding downstream 749458 7383177 ~ 7411436 (-)
XLOC_003910 vtg3 coding downstream 780206 7359496 ~ 7380688 (-)
XLOC_003909 si:dkey-197i20.6 coding downstream 804899 7350926 ~ 7355995 (-)
XLOC_003915 pimr203 coding upstream 33831 8201842 ~ 8208464 (-)
XLOC_003916 pimr204 coding upstream 53824 8221835 ~ 8271374 (-)
XLOC_003917 si:cabz01021066.1 coding upstream 71971 8239982 ~ 8262105 (-)
XLOC_003918 pimr202 coding upstream 116675 8284686 ~ 8288925 (-)
XLOC_003919 si:ch211-247n2.1 coding upstream 135930 8303941 ~ 8350945 (-)
XLOC_003938 BX324177.10 misc upstream 3170793 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 3199583 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 3202444 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 3212893 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 3215822 11383833 ~ 11384130 (-)
XLOC_003908 NA non-coding downstream 811397 7345800 ~ 7349497 (-)
XLOC_003904 CR925817.2 non-coding downstream 1044531 7116247 ~ 7116363 (-)
XLOC_003895 NA non-coding downstream 1360956 6792546 ~ 6799938 (-)
XLOC_003894 BX936438.1 non-coding downstream 1378818 6780708 ~ 6782076 (-)
XLOC_003920 CR847563.2 non-coding upstream 308950 8476961 ~ 8515750 (-)
XLOC_003922 NA non-coding upstream 815640 8983651 ~ 9523184 (-)
XLOC_003923 CR788237.2 non-coding upstream 1117812 9285823 ~ 9286476 (-)
XLOC_003924 CR788237.1 non-coding upstream 1124270 9292281 ~ 9293411 (-)
XLOC_003925 NA non-coding upstream 1239660 9407671 ~ 9408005 (-)

Expression


Co-expression Network