XLOC_003917 (si:cabz01021066.1)


Basic Information

Item Value
gene id XLOC_003917
gene name si:cabz01021066.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8239982 ~ 8262105 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007503
TGGGAGCTTCGGCTTAACATTCAAAGCAGTTCGTAAATCTGATGGCAAGGAGgttGCCATCAAGAAGATTCTGAAGAGAAACAATCCACGTTACATCTCTGTTCCTGGTTGTTCCAGACCTGTGTGTGAAGAAGCAGCGTATATGCTAATACTGAAACATCCTTCAGCAAGCATGCATGTGATAGAAATGTATGAGTGGTTTGATCAAGCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATATACATGCATGACAAACTGTCAGAAGGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGCATTGACCATGATGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAAAATCAGAGCAGAAGATTATCAAGCTGTCGTCTTTTCAAGCATCTGGAACGTAGGCTACATGCTGTATTTCATGGTGCATGGAAGACAACTAGTGAACAGAATTTCTGGAAGGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGATAGGAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCAacaaaaaatgttcaataaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATAGGCCTTTAGCAGAgacattacactgaactgaatttCAACAGAGACATTtgataagctgctttgacaacaTTTGCATTGTATAAGTTttgtaaataaagatgaattgacaTGTA
>TCONS_00007504
tagCAACTGATATCTGCAGGAAGGtgactctccaggaacagggctggcCACCCCTGCCCTATACCCTCATCTACTACTCCTTACGTTAGTCTAGTAAATTAGTGTATTTAAATGAGGGAATGTAAACAAATAAGTCAATTGAAgcagttttgtttgtgcttttctGGTTGATAAACCCCTCAGATGGATTGGATTCTGCTTCGTCAGACCCAAGTTATTTAACACAACAAGCTGTATGCTAGTAATGAAACACTGTAGTTTTATTTGTCATGTATAGGaatgttatttttacaattaaataaatgtattcattaattcatttaaggGTACAGGGCTGCGATTTCAGACATAGCCATTGGTTAACTTGCTTCACAAGTGTTTGATTAGAGTTtaagcaaaactctgcaggacacagaCCCTCCAGGACTCTCCAGTAgcttttttaataacaaatttcagAAGATATCTTTATAAATGTCAGCTTTAATGTCTTATACTGTCTTGATTAACTATCTCTTTCTCCTTGTACAGACTGCAGGGATCTGATAGAAAAGTGCATGGATAGGAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCAacaaaaaatgttcaataaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATAGGCCTTTAGCAGAgacattacactgaactgaatttCAACAGAGACATTtgataagctgctttgacaacaT

Function

symbol description
si:cabz01021066.1 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105457

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007503 False 990 mRNA 0.44 5 8239982 8262105
TCONS_00007504 True 882 lncRNA 0.39 2 8240025 8241202

Neighbor

gene id symbol gene type direction distance location
XLOC_003915 pimr203 coding downstream 31518 8201842 ~ 8208464 (-)
XLOC_003914 uox coding downstream 71971 8160894 ~ 8168011 (-)
XLOC_003913 ttll7 coding downstream 113719 7981243 ~ 8126263 (-)
XLOC_003912 NA coding downstream 443650 7773832 ~ 7796332 (-)
XLOC_003911 adgrl4 coding downstream 828546 7383177 ~ 7411436 (-)
XLOC_003918 pimr202 coding upstream 22581 8284686 ~ 8288925 (-)
XLOC_003919 si:ch211-247n2.1 coding upstream 41836 8303941 ~ 8350945 (-)
XLOC_003920 CR847563.2 coding upstream 214856 8476961 ~ 8515750 (-)
XLOC_003921 si:ch211-51h4.2 coding upstream 373680 8635785 ~ 8782871 (-)
XLOC_003922 NA coding upstream 721546 8983651 ~ 9523184 (-)
XLOC_003938 BX324177.10 misc upstream 3076699 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 3105489 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 3108350 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 3118799 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 3121728 11383833 ~ 11384130 (-)
XLOC_003908 NA non-coding downstream 890485 7345800 ~ 7349497 (-)
XLOC_003904 CR925817.2 non-coding downstream 1123619 7116247 ~ 7116363 (-)
XLOC_003895 NA non-coding downstream 1440044 6792546 ~ 6799938 (-)
XLOC_003894 BX936438.1 non-coding downstream 1457906 6780708 ~ 6782076 (-)
XLOC_003923 CR788237.2 non-coding upstream 1023718 9285823 ~ 9286476 (-)
XLOC_003924 CR788237.1 non-coding upstream 1030176 9292281 ~ 9293411 (-)
XLOC_003925 NA non-coding upstream 1145566 9407671 ~ 9408005 (-)

Expression


Co-expression Network