RNA id: TCONS_00007503


Basic Information

Item Value
RNA id TCONS_00007503
length 990
RNA type mRNA
GC content 0.44
exon number 5
gene id XLOC_003917
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8239982 ~ 8262105 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGGGAGCTTCGGCTTAACATTCAAAGCAGTTCGTAAATCTGATGGCAAGGAGgttGCCATCAAGAAGATTCTGAAGAGAAACAATCCACGTTACATCTCTGTTCCTGGTTGTTCCAGACCTGTGTGTGAAGAAGCAGCGTATATGCTAATACTGAAACATCCTTCAGCAAGCATGCATGTGATAGAAATGTATGAGTGGTTTGATCAAGCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATATACATGCATGACAAACTGTCAGAAGGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGCATTGACCATGATGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAAAATCAGAGCAGAAGATTATCAAGCTGTCGTCTTTTCAAGCATCTGGAACGTAGGCTACATGCTGTATTTCATGGTGCATGGAAGACAACTAGTGAACAGAATTTCTGGAAGGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGATAGGAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTTCAacaaaaaatgttcaataaatcaTCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTCCATGGGATAGGCCTTTAGCAGAgacattacactgaactgaatttCAACAGAGACATTtgataagctgctttgacaacaTTTGCATTGTATAAGTTttgtaaataaagatgaattgacaTGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000173225

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007501 lncRNA downstream 16930 8221872 ~ 8223052 (-) False XLOC_003916
TCONS_00007499 lncRNA downstream 35123 8201885 ~ 8204859 (-) True XLOC_003915
TCONS_00007493 lncRNA downstream 142510 8056468 ~ 8097472 (-) False XLOC_003913
TCONS_00007489 lncRNA downstream 443650 7782736 ~ 7796332 (-) False XLOC_003912
TCONS_00008760 lncRNA downstream 453217 7782736 ~ 7786765 (-) False XLOC_003912
TCONS_00007508 lncRNA upstream 5056 8267161 ~ 8268336 (-) True XLOC_003916
TCONS_00007510 lncRNA upstream 22780 8284885 ~ 8285892 (-) True XLOC_003918
TCONS_00007513 lncRNA upstream 214856 8476961 ~ 8515378 (-) False XLOC_003920
TCONS_00008761 lncRNA upstream 214920 8477025 ~ 8515693 (-) False XLOC_003920
TCONS_00007514 lncRNA upstream 221714 8483819 ~ 8515378 (-) False XLOC_003920
TCONS_00007500 mRNA downstream 13894 8221835 ~ 8226088 (-) False XLOC_003916
TCONS_00007498 mRNA downstream 31518 8201842 ~ 8208464 (-) False XLOC_003915
TCONS_00007495 mRNA downstream 71971 8160894 ~ 8168011 (-) False XLOC_003914
TCONS_00007496 mRNA downstream 72110 8160912 ~ 8167872 (-) False XLOC_003914
TCONS_00007497 mRNA downstream 72183 8161313 ~ 8167799 (-) True XLOC_003914
TCONS_00007506 mRNA upstream 4399 8266504 ~ 8269227 (-) False XLOC_003916
TCONS_00007507 mRNA upstream 5013 8267118 ~ 8271374 (-) False XLOC_003916
TCONS_00007509 mRNA upstream 22581 8284686 ~ 8288925 (-) False XLOC_003918
TCONS_00007511 mRNA upstream 41836 8303941 ~ 8320868 (-) False XLOC_003919
TCONS_00007512 mRNA upstream 43902 8306007 ~ 8350945 (-) True XLOC_003919
TCONS_00007494 other downstream 113787 8111369 ~ 8126195 (-) True XLOC_003913
TCONS_00007477 other downstream 1123619 7116247 ~ 7116363 (-) True XLOC_003904
TCONS_00007463 other downstream 1291964 6944300 ~ 6948018 (-) False XLOC_003898
TCONS_00007456 other downstream 1457906 6780708 ~ 6782076 (-) True XLOC_003894
TCONS_00007441 other downstream 2033393 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007548 other upstream 3063417 11325522 ~ 11331050 (-) False XLOC_003936
TCONS_00007549 other upstream 3068620 11330725 ~ 11331090 (-) True XLOC_003936
TCONS_00007551 other upstream 3076699 11338804 ~ 11339100 (-) True XLOC_003938
TCONS_00007552 other upstream 3105489 11367594 ~ 11367890 (-) True XLOC_003942
TCONS_00007553 other upstream 3108350 11370455 ~ 11370653 (-) True XLOC_003943

Expression Profile

//