RNA id: TCONS_00007552


Basic Information

Item Value
RNA id TCONS_00007552
length 297
RNA type misc_RNA
GC content 0.59
exon number 1
gene id XLOC_003942
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 11367594 ~ 11367890 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGGTTCAGTGGCGCGCGCCTGTAATCCAAGCTGCTTGGAGGCTGAGTCTGCGGatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTTGATCGGGTGTCCGCACTAAGTTCGGTATCGATATGGTGCTCCTGGGTGAGCTCGGGACCGCCAGGTCGTTTAAAGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAGCTCCCGTGCCGATCAATAGTGGGATCGCGCCTGTGAATAGACACTGCAGTTCAGCCTGAGCAACACAGTCAGACGCAGACttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179671

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008458 lncRNA downstream 10407 11356893 ~ 11357187 (-) True XLOC_003941
TCONS_00008457 lncRNA downstream 13326 11353974 ~ 11354268 (-) True XLOC_003940
TCONS_00008456 lncRNA downstream 24020 11343280 ~ 11343574 (-) True XLOC_003939
TCONS_00007547 lncRNA downstream 41974 11319190 ~ 11325620 (-) False XLOC_003936
TCONS_00007541 lncRNA downstream 507488 10859024 ~ 10860106 (-) True XLOC_003933
TCONS_00008459 lncRNA upstream 36706 11404596 ~ 11404890 (-) True XLOC_003946
TCONS_00007564 lncRNA upstream 83770 11451660 ~ 11451935 (-) True XLOC_003955
TCONS_00008769 lncRNA upstream 227104 11594994 ~ 11601880 (-) True XLOC_003960
TCONS_00007573 lncRNA upstream 271593 11639483 ~ 11706093 (-) False XLOC_003962
TCONS_00007574 lncRNA upstream 271763 11639653 ~ 11706084 (-) False XLOC_003962
TCONS_00007550 mRNA downstream 30608 11332652 ~ 11336986 (-) True XLOC_003937
TCONS_00007546 mRNA downstream 36448 11319141 ~ 11331146 (-) False XLOC_003936
TCONS_00007545 mRNA downstream 36542 11319141 ~ 11331052 (-) False XLOC_003936
TCONS_00007544 mRNA downstream 66237 11275540 ~ 11301357 (-) True XLOC_003935
TCONS_00007543 mRNA downstream 66311 11274940 ~ 11301283 (-) False XLOC_003935
TCONS_00007565 mRNA upstream 86655 11454545 ~ 11458208 (-) True XLOC_003956
TCONS_00007566 mRNA upstream 100676 11468566 ~ 11471857 (-) True XLOC_003957
TCONS_00007567 mRNA upstream 147888 11515778 ~ 11518469 (-) True XLOC_003958
TCONS_00007568 mRNA upstream 198106 11565996 ~ 11575070 (-) False XLOC_003959
TCONS_00007571 mRNA upstream 228083 11595973 ~ 11625630 (-) False XLOC_003961
TCONS_00007551 other downstream 28494 11338804 ~ 11339100 (-) True XLOC_003938
TCONS_00007549 other downstream 36504 11330725 ~ 11331090 (-) True XLOC_003936
TCONS_00007548 other downstream 36544 11325522 ~ 11331050 (-) False XLOC_003936
TCONS_00007494 other downstream 3241399 8111369 ~ 8126195 (-) True XLOC_003913
TCONS_00007477 other downstream 4251231 7116247 ~ 7116363 (-) True XLOC_003904
TCONS_00007553 other upstream 2565 11370455 ~ 11370653 (-) True XLOC_003943
TCONS_00007554 other upstream 13014 11380904 ~ 11381204 (-) True XLOC_003944
TCONS_00007555 other upstream 15943 11383833 ~ 11384130 (-) True XLOC_003945
TCONS_00007556 other upstream 44712 11412602 ~ 11412898 (-) True XLOC_003947
TCONS_00007557 other upstream 47623 11415513 ~ 11415809 (-) True XLOC_003948