RNA id: TCONS_00007557



Basic Information


Item Value
RNA id TCONS_00007557
length 297
RNA type misc_RNA
GC content 0.59
exon number 1
gene id XLOC_003948
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 11415513 ~ 11415809 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCCGGGTTCAGTGGCGCGCGCCTGTAATCCAAGTTACTGGGAGGCTGAGGCTGCGGATCGCTTGAGTTCAGGGCTTCTGGACTGCAGTGGACTATGTTGATCGGGTGTCCACGCTAAGTTCGGTATCGATATGGTGCTGCTGGGGGAGCTTGGGACCACCAGGTCGTTTAAGGAGGGGTGAACCGACCCAGGCCGGAGACGGAGCAGGTCAAAGCCCCCGTGCTGATCAGTAGTGTGATCGCGCCTGTGAATAGACACTGCAGTGCAGCCTGAGCGACACAGACAGACGCAGACTTT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190919

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008459 lncRNA downstream 10623 11404596 ~ 11404890 (-) True XLOC_003946
TCONS_00008458 lncRNA downstream 58326 11356893 ~ 11357187 (-) True XLOC_003941
TCONS_00008457 lncRNA downstream 61245 11353974 ~ 11354268 (-) True XLOC_003940
TCONS_00008456 lncRNA downstream 71939 11343280 ~ 11343574 (-) True XLOC_003939
TCONS_00007547 lncRNA downstream 89893 11319190 ~ 11325620 (-) False XLOC_003936
TCONS_00007564 lncRNA upstream 35851 11451660 ~ 11451935 (-) True XLOC_003955
TCONS_00008769 lncRNA upstream 179185 11594994 ~ 11601880 (-) True XLOC_003960
TCONS_00007573 lncRNA upstream 223674 11639483 ~ 11706093 (-) False XLOC_003962
TCONS_00007574 lncRNA upstream 223844 11639653 ~ 11706084 (-) False XLOC_003962
TCONS_00008770 lncRNA upstream 230697 11646506 ~ 11706136 (-) True XLOC_003962
TCONS_00007550 mRNA downstream 78527 11332652 ~ 11336986 (-) True XLOC_003937
TCONS_00007546 mRNA downstream 84367 11319141 ~ 11331146 (-) False XLOC_003936
TCONS_00007545 mRNA downstream 84461 11319141 ~ 11331052 (-) False XLOC_003936
TCONS_00007544 mRNA downstream 114156 11275540 ~ 11301357 (-) True XLOC_003935
TCONS_00007543 mRNA downstream 114230 11274940 ~ 11301283 (-) False XLOC_003935
TCONS_00007565 mRNA upstream 38736 11454545 ~ 11458208 (-) True XLOC_003956
TCONS_00007566 mRNA upstream 52757 11468566 ~ 11471857 (-) True XLOC_003957
TCONS_00007567 mRNA upstream 99969 11515778 ~ 11518469 (-) True XLOC_003958
TCONS_00007568 mRNA upstream 150187 11565996 ~ 11575070 (-) False XLOC_003959
TCONS_00007571 mRNA upstream 180164 11595973 ~ 11625630 (-) False XLOC_003961
TCONS_00007556 other downstream 2615 11412602 ~ 11412898 (-) True XLOC_003947
TCONS_00007555 other downstream 31383 11383833 ~ 11384130 (-) True XLOC_003945
TCONS_00007554 other downstream 34309 11380904 ~ 11381204 (-) True XLOC_003944
TCONS_00007553 other downstream 44860 11370455 ~ 11370653 (-) True XLOC_003943
TCONS_00007552 other downstream 47623 11367594 ~ 11367890 (-) True XLOC_003942
TCONS_00007558 other upstream 8272 11424081 ~ 11424377 (-) True XLOC_003949
TCONS_00007559 other upstream 11069 11426878 ~ 11427174 (-) True XLOC_003950
TCONS_00007560 other upstream 19638 11435447 ~ 11435743 (-) True XLOC_003951
TCONS_00007561 other upstream 22082 11437891 ~ 11438187 (-) True XLOC_003952
TCONS_00007562 other upstream 29880 11445689 ~ 11445985 (-) True XLOC_003953

Expression Profile


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