RNA id: TCONS_00007560



Basic Information


Item Value
RNA id TCONS_00007560
length 297
RNA type misc_RNA
GC content 0.61
exon number 1
gene id XLOC_003951
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 11435447 ~ 11435743 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCCGGGTTCAGTGGCGCGCGCCTGTAATCCAAGCTGCTGGGAGGCTGAGGCTGCGGatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTTGATCGGGTGTCCGCACTAAGTTCGGTATCGATATGGTGCTCCTGGGTGAGCTCGGGACCGCCAGGTCGTTTAAGGAGGGGTGAACCGGCCCAGGTCGGAGACGGAGCAGGTCAAAGCTCCCGTGCCGATCAGTAGTGGGATCGCGCCTGTGAATAGACACTGCAGTGCAGCCTGAGcaacacagagagacgcagacttt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193230

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008459 lncRNA downstream 30557 11404596 ~ 11404890 (-) True XLOC_003946
TCONS_00008458 lncRNA downstream 78260 11356893 ~ 11357187 (-) True XLOC_003941
TCONS_00008457 lncRNA downstream 81179 11353974 ~ 11354268 (-) True XLOC_003940
TCONS_00008456 lncRNA downstream 91873 11343280 ~ 11343574 (-) True XLOC_003939
TCONS_00007547 lncRNA downstream 109827 11319190 ~ 11325620 (-) False XLOC_003936
TCONS_00007564 lncRNA upstream 15917 11451660 ~ 11451935 (-) True XLOC_003955
TCONS_00008769 lncRNA upstream 159251 11594994 ~ 11601880 (-) True XLOC_003960
TCONS_00007573 lncRNA upstream 203740 11639483 ~ 11706093 (-) False XLOC_003962
TCONS_00007574 lncRNA upstream 203910 11639653 ~ 11706084 (-) False XLOC_003962
TCONS_00008770 lncRNA upstream 210763 11646506 ~ 11706136 (-) True XLOC_003962
TCONS_00007550 mRNA downstream 98461 11332652 ~ 11336986 (-) True XLOC_003937
TCONS_00007546 mRNA downstream 104301 11319141 ~ 11331146 (-) False XLOC_003936
TCONS_00007545 mRNA downstream 104395 11319141 ~ 11331052 (-) False XLOC_003936
TCONS_00007544 mRNA downstream 134090 11275540 ~ 11301357 (-) True XLOC_003935
TCONS_00007543 mRNA downstream 134164 11274940 ~ 11301283 (-) False XLOC_003935
TCONS_00007565 mRNA upstream 18802 11454545 ~ 11458208 (-) True XLOC_003956
TCONS_00007566 mRNA upstream 32823 11468566 ~ 11471857 (-) True XLOC_003957
TCONS_00007567 mRNA upstream 80035 11515778 ~ 11518469 (-) True XLOC_003958
TCONS_00007568 mRNA upstream 130253 11565996 ~ 11575070 (-) False XLOC_003959
TCONS_00007571 mRNA upstream 160230 11595973 ~ 11625630 (-) False XLOC_003961
TCONS_00007559 other downstream 8273 11426878 ~ 11427174 (-) True XLOC_003950
TCONS_00007558 other downstream 11070 11424081 ~ 11424377 (-) True XLOC_003949
TCONS_00007557 other downstream 19638 11415513 ~ 11415809 (-) True XLOC_003948
TCONS_00007556 other downstream 22549 11412602 ~ 11412898 (-) True XLOC_003947
TCONS_00007555 other downstream 51317 11383833 ~ 11384130 (-) True XLOC_003945
TCONS_00007561 other upstream 2148 11437891 ~ 11438187 (-) True XLOC_003952
TCONS_00007562 other upstream 9946 11445689 ~ 11445985 (-) True XLOC_003953
TCONS_00007563 other upstream 11446 11447189 ~ 11447485 (-) True XLOC_003954
TCONS_00007569 other upstream 130608 11566351 ~ 11573760 (-) True XLOC_003959
TCONS_00007578 other upstream 409858 11845601 ~ 11870971 (-) False XLOC_003964

Expression Profile


//