Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007569 |
| length | 1155 |
| RNA type | processed_transcript |
| GC content | 0.46 |
| exon number | 8 |
| gene id | XLOC_003959 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 11565996 ~ 11575070 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005882 | intermediate filament | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050417-50 | Predicted to enable structural molecule activity. Predicted to be located in intermediate filament. Is expressed in several structures, including EVL; ectoderm; margin; pectoral fin bud; and peripheral olfactory organ. |
| ensembl_id | ENSDART00000136114 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00007564 | lncRNA | downstream | 114416 | 11451660 ~ 11451935 (-) | True | XLOC_003955 |
| TCONS_00008459 | lncRNA | downstream | 161461 | 11404596 ~ 11404890 (-) | True | XLOC_003946 |
| TCONS_00008458 | lncRNA | downstream | 209164 | 11356893 ~ 11357187 (-) | True | XLOC_003941 |
| TCONS_00008457 | lncRNA | downstream | 212083 | 11353974 ~ 11354268 (-) | True | XLOC_003940 |
| TCONS_00008456 | lncRNA | downstream | 222777 | 11343280 ~ 11343574 (-) | True | XLOC_003939 |
| TCONS_00008769 | lncRNA | upstream | 21234 | 11594994 ~ 11601880 (-) | True | XLOC_003960 |
| TCONS_00007573 | lncRNA | upstream | 65723 | 11639483 ~ 11706093 (-) | False | XLOC_003962 |
| TCONS_00007574 | lncRNA | upstream | 65893 | 11639653 ~ 11706084 (-) | False | XLOC_003962 |
| TCONS_00008770 | lncRNA | upstream | 72746 | 11646506 ~ 11706136 (-) | True | XLOC_003962 |
| TCONS_00007591 | lncRNA | upstream | 591963 | 12165723 ~ 12166007 (-) | True | XLOC_003972 |
| TCONS_00007567 | mRNA | downstream | 47882 | 11515778 ~ 11518469 (-) | True | XLOC_003958 |
| TCONS_00007566 | mRNA | downstream | 94494 | 11468566 ~ 11471857 (-) | True | XLOC_003957 |
| TCONS_00007565 | mRNA | downstream | 108143 | 11454545 ~ 11458208 (-) | True | XLOC_003956 |
| TCONS_00007550 | mRNA | downstream | 229365 | 11332652 ~ 11336986 (-) | True | XLOC_003937 |
| TCONS_00007546 | mRNA | downstream | 235205 | 11319141 ~ 11331146 (-) | False | XLOC_003936 |
| TCONS_00007571 | mRNA | upstream | 22213 | 11595973 ~ 11625630 (-) | False | XLOC_003961 |
| TCONS_00007570 | mRNA | upstream | 22213 | 11595973 ~ 11625630 (-) | False | XLOC_003961 |
| TCONS_00007572 | mRNA | upstream | 23312 | 11597072 ~ 11625369 (-) | True | XLOC_003961 |
| TCONS_00007575 | mRNA | upstream | 208213 | 11781973 ~ 11791718 (-) | False | XLOC_003963 |
| TCONS_00007576 | mRNA | upstream | 209704 | 11783464 ~ 11792766 (-) | True | XLOC_003963 |
| TCONS_00007563 | other | downstream | 118866 | 11447189 ~ 11447485 (-) | True | XLOC_003954 |
| TCONS_00007562 | other | downstream | 120366 | 11445689 ~ 11445985 (-) | True | XLOC_003953 |
| TCONS_00007561 | other | downstream | 128164 | 11437891 ~ 11438187 (-) | True | XLOC_003952 |
| TCONS_00007560 | other | downstream | 130608 | 11435447 ~ 11435743 (-) | True | XLOC_003951 |
| TCONS_00007559 | other | downstream | 139177 | 11426878 ~ 11427174 (-) | True | XLOC_003950 |
| TCONS_00007578 | other | upstream | 271841 | 11845601 ~ 11870971 (-) | False | XLOC_003964 |
| TCONS_00007587 | other | upstream | 522439 | 12096199 ~ 12104916 (-) | False | XLOC_003969 |
| TCONS_00007590 | other | upstream | 587898 | 12161658 ~ 12161955 (-) | True | XLOC_003971 |
| TCONS_00007592 | other | upstream | 594242 | 12168002 ~ 12168298 (-) | True | XLOC_003973 |
| TCONS_00007593 | other | upstream | 595601 | 12169361 ~ 12169654 (-) | True | XLOC_003974 |
