RNA id: TCONS_00007593



Basic Information


Item Value
RNA id TCONS_00007593
length 294
RNA type misc_RNA
GC content 0.57
exon number 1
gene id XLOC_003974
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12169361 ~ 12169654 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCTCTGATTCTCTCAGCTCTGTAATCCAAGCTACTGGGAGGCTGAGACTGCGGatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTCGATCGGGTGTCTGCACTAAGTTTGGTATCGATATGGTGCTCTTGGGGGAGCTCGGGACCACCAGGCCATATAAGGAGAGGTGAACCGGCCCAGGCTGGAGACGGAGCAGGTCAAAGCCCCCGTGCCGTTCAGTAGTGAGATCGCGCCAGTGAATAGACACTGCAGTGCAGCCTGAgcgacacagagagacgcagacttT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000123473

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00007591 lncRNA downstream 3354 12165723 ~ 12166007 (-) True XLOC_003972
TCONS_00008770 lncRNA downstream 463225 11646506 ~ 11706136 (-) True XLOC_003962
TCONS_00007573 lncRNA downstream 463268 11639483 ~ 11706093 (-) False XLOC_003962
TCONS_00007574 lncRNA downstream 463277 11639653 ~ 11706084 (-) False XLOC_003962
TCONS_00008769 lncRNA downstream 567481 11594994 ~ 11601880 (-) True XLOC_003960
TCONS_00007594 lncRNA upstream 16200 12185854 ~ 12186144 (-) True XLOC_003975
TCONS_00007600 lncRNA upstream 43495 12213149 ~ 12213431 (-) True XLOC_003977
TCONS_00007602 lncRNA upstream 48452 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00008771 lncRNA upstream 259729 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00008772 lncRNA upstream 259729 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00007589 mRNA downstream 10949 12108355 ~ 12158412 (-) True XLOC_003970
TCONS_00007588 mRNA downstream 64444 12096199 ~ 12104917 (-) True XLOC_003969
TCONS_00007586 mRNA downstream 117556 12011180 ~ 12051805 (-) True XLOC_003968
TCONS_00007585 mRNA downstream 118078 12009735 ~ 12051283 (-) False XLOC_003968
TCONS_00007584 mRNA downstream 161360 11983465 ~ 12008001 (-) True XLOC_003967
TCONS_00007595 mRNA upstream 18466 12188120 ~ 12198904 (-) False XLOC_003976
TCONS_00007596 mRNA upstream 18595 12188249 ~ 12198765 (-) False XLOC_003976
TCONS_00007597 mRNA upstream 20514 12190168 ~ 12198904 (-) False XLOC_003976
TCONS_00007598 mRNA upstream 20917 12190571 ~ 12198914 (-) False XLOC_003976
TCONS_00007599 mRNA upstream 20918 12190572 ~ 12194086 (-) True XLOC_003976
TCONS_00007592 other downstream 1063 12168002 ~ 12168298 (-) True XLOC_003973
TCONS_00007590 other downstream 7406 12161658 ~ 12161955 (-) True XLOC_003971
TCONS_00007587 other downstream 64445 12096199 ~ 12104916 (-) False XLOC_003969
TCONS_00007578 other downstream 298390 11845601 ~ 11870971 (-) False XLOC_003964
TCONS_00007569 other downstream 595601 11566351 ~ 11573760 (-) True XLOC_003959
TCONS_00007605 other upstream 51236 12220890 ~ 12221186 (-) True XLOC_003979
TCONS_00007606 other upstream 60176 12229830 ~ 12232900 (-) False XLOC_003980
TCONS_00007611 other upstream 84206 12253860 ~ 12254156 (-) True XLOC_003983
TCONS_00007613 other upstream 119718 12289372 ~ 12289668 (-) True XLOC_003985
TCONS_00007616 other upstream 153976 12323630 ~ 12323926 (-) True XLOC_003988

Expression Profile


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