Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007541 |
| length | 933 |
| lncRNA type | lincRNA |
| GC content | 0.39 |
| exon number | 2 |
| gene id | XLOC_003933 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 10859024 ~ 10860106 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0071295 | cellular response to vitamin | biological_process |
| GO:0071305 | cellular response to vitamin D | biological_process |
| GO:0007584 | response to nutrient | biological_process |
| GO:0033273 | response to vitamin | biological_process |
| GO:0033280 | response to vitamin D | biological_process |
| GO:0001725 | stress fiber | cellular_component |
| GO:0097517 | contractile actin filament bundle | cellular_component |
| GO:0042641 | actomyosin | cellular_component |
| ensembl_id | ENSDART00000169363 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008768 | lncRNA | downstream | 530497 | 10305130 ~ 10328527 (-) | True | XLOC_003927 |
| TCONS_00008455 | lncRNA | downstream | 1335840 | 9521226 ~ 9523184 (-) | True | XLOC_003922 |
| TCONS_00008766 | lncRNA | downstream | 1336407 | 9510569 ~ 9522617 (-) | False | XLOC_003922 |
| TCONS_00008765 | lncRNA | downstream | 1336458 | 9510569 ~ 9522566 (-) | False | XLOC_003922 |
| TCONS_00008767 | lncRNA | downstream | 1336475 | 9512829 ~ 9522549 (-) | False | XLOC_003922 |
| TCONS_00007547 | lncRNA | upstream | 459084 | 11319190 ~ 11325620 (-) | False | XLOC_003936 |
| TCONS_00008456 | lncRNA | upstream | 483174 | 11343280 ~ 11343574 (-) | True | XLOC_003939 |
| TCONS_00008457 | lncRNA | upstream | 493868 | 11353974 ~ 11354268 (-) | True | XLOC_003940 |
| TCONS_00008458 | lncRNA | upstream | 496787 | 11356893 ~ 11357187 (-) | True | XLOC_003941 |
| TCONS_00008459 | lncRNA | upstream | 544490 | 11404596 ~ 11404890 (-) | True | XLOC_003946 |
| TCONS_00007540 | mRNA | downstream | 8088 | 10832560 ~ 10850936 (-) | True | XLOC_003932 |
| TCONS_00007539 | mRNA | downstream | 30485 | 10812949 ~ 10828539 (-) | True | XLOC_003931 |
| TCONS_00007535 | mRNA | downstream | 60960 | 10672679 ~ 10798064 (-) | False | XLOC_003930 |
| TCONS_00007536 | mRNA | downstream | 60960 | 10683279 ~ 10798064 (-) | False | XLOC_003930 |
| TCONS_00007538 | mRNA | downstream | 60960 | 10685626 ~ 10798064 (-) | True | XLOC_003930 |
| TCONS_00007542 | mRNA | upstream | 403345 | 11263451 ~ 11266882 (-) | True | XLOC_003934 |
| TCONS_00007543 | mRNA | upstream | 414834 | 11274940 ~ 11301283 (-) | False | XLOC_003935 |
| TCONS_00007544 | mRNA | upstream | 415434 | 11275540 ~ 11301357 (-) | True | XLOC_003935 |
| TCONS_00007545 | mRNA | upstream | 459035 | 11319141 ~ 11331052 (-) | False | XLOC_003936 |
| TCONS_00007546 | mRNA | upstream | 459035 | 11319141 ~ 11331146 (-) | False | XLOC_003936 |
| TCONS_00007494 | other | downstream | 2732829 | 8111369 ~ 8126195 (-) | True | XLOC_003913 |
| TCONS_00007477 | other | downstream | 3742661 | 7116247 ~ 7116363 (-) | True | XLOC_003904 |
| TCONS_00007463 | other | downstream | 3911006 | 6944300 ~ 6948018 (-) | False | XLOC_003898 |
| TCONS_00007456 | other | downstream | 4076948 | 6780708 ~ 6782076 (-) | True | XLOC_003894 |
| TCONS_00007441 | other | downstream | 4652435 | 6197276 ~ 6206589 (-) | False | XLOC_003884 |
| TCONS_00007548 | other | upstream | 465416 | 11325522 ~ 11331050 (-) | False | XLOC_003936 |
| TCONS_00007549 | other | upstream | 470619 | 11330725 ~ 11331090 (-) | True | XLOC_003936 |
| TCONS_00007551 | other | upstream | 478698 | 11338804 ~ 11339100 (-) | True | XLOC_003938 |
| TCONS_00007552 | other | upstream | 507488 | 11367594 ~ 11367890 (-) | True | XLOC_003942 |
| TCONS_00007553 | other | upstream | 510349 | 11370455 ~ 11370653 (-) | True | XLOC_003943 |
