RNA id: TCONS_00007498


Basic Information

Item Value
RNA id TCONS_00007498
length 1528
RNA type mRNA
GC content 0.46
exon number 7
gene id XLOC_003915
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8201842 ~ 8208464 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ggagtgTCTGGGCTCTGGAACACTGTTGATCCAGAtccagagcctgtccctggagtgTCTGGGCTCTGGAACACTGTTGATCCAGAtccagagcctgtccctggagtgTCTGGTCTCTGTAACTCTGTTGATCCAGATCCAAAATCTGTCTCTGGAGTGTTTGGGCTTCAGTACACTGTTGATCCAAATCCAGAGCCTGTCTCTAAAGTGTCTGTTCTCCGAAACACTGAACACTGTTGATCCAGATCCAGAGCCTGCACTTGGACTGTATCGGTTTTGGTACACTTTTGTTCCTGAGCTAGAGTTTGCCCTTGGACCGCTTCATCTCAGAGCCAATTTAAATCCAGATCCAGACCCTGTTGCTGGACCATCTGTGGTTCAGAACATGGTAGATCAGGAACCAGAGCCTGTGCCTGGACCATCTAGTCTCCAAGACACGTCTAATGTGAGGTCCTCATCTGCCTCAGGAGCCCCTAATTTTGAGCCAAATACTGgatctttgattggtctctaCGGCTTTGGAGAAACGATAGGAGGCGGGAGCTTCGGCTTAACATTCAAAGCAGTTCGTAAATCTGATGGCAAGGAGgttGCCATCAAGAAGATTCTGAAGAGAAACAATCCACGTTACATCTCTGTTCCTGGTTGTTCCAGACCTGTGTGTGAAGAAGCAGCGTATATGCTAATACTGAAACATCCTTCAGCAAGCATGCATGTGATAGAAATGTATGAGTGGTTTGATCAAGCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATATACATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGCATTGACCATGATGTTTCCCACAACGACATGCATGCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAAAATCAGAGCAGAAGATTATCAAGCTGTCGTCTTTTCAAGCATCTGGAACGTAGGCTACATGCTGTATTTCATGGTGCATGGAAGACAACTAGTGAACAGAATTTCTGGAAGGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCTGGGATCTGATAGAAAAGTGCATGGATAAAAAATTGTCAACGTTGGAGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGAACTTCACACACAAAGCAGCAAAATCTtcaacaaaaaaatcattaaaaaatcatCAAAACTCATCTATAAAGAAGCTTTTCCCGATCCAGGACCACCGTCTGTGCTCATAAACACTACAGGATCAGCGTTTCCCCAGGAAACTGCCTCTTTTGAGCTACTCTTCATGGGATCGGCCTTCAGCAGAgacattacactgaactgaatttCAACAGAGACATTtgtcaagctgctttgacaacATTTGCATTGTATAAGTTttgtaaataaagatgaattgacaTGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000161283

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007493 lncRNA downstream 104370 8056468 ~ 8097472 (-) False XLOC_003913
TCONS_00007489 lncRNA downstream 405510 7782736 ~ 7796332 (-) False XLOC_003912
TCONS_00008758 lncRNA downstream 405554 7773832 ~ 7796288 (-) False XLOC_003912
TCONS_00007501 lncRNA upstream 13408 8221872 ~ 8223052 (-) False XLOC_003916
TCONS_00007504 lncRNA upstream 31561 8240025 ~ 8241202 (-) True XLOC_003917
TCONS_00007508 lncRNA upstream 58697 8267161 ~ 8268336 (-) True XLOC_003916
TCONS_00007510 lncRNA upstream 76421 8284885 ~ 8285892 (-) True XLOC_003918
TCONS_00007513 lncRNA upstream 268497 8476961 ~ 8515378 (-) False XLOC_003920
TCONS_00007495 mRNA downstream 33831 8160894 ~ 8168011 (-) False XLOC_003914
TCONS_00007496 mRNA downstream 33970 8160912 ~ 8167872 (-) False XLOC_003914
TCONS_00007497 mRNA downstream 34043 8161313 ~ 8167799 (-) True XLOC_003914
TCONS_00007490 mRNA downstream 75579 7981243 ~ 8126263 (-) False XLOC_003913
TCONS_00007491 mRNA downstream 75617 7984757 ~ 8126225 (-) False XLOC_003913
TCONS_00007500 mRNA upstream 13371 8221835 ~ 8226088 (-) False XLOC_003916
TCONS_00007502 mRNA upstream 13756 8222220 ~ 8269227 (-) False XLOC_003916
TCONS_00007503 mRNA upstream 31518 8239982 ~ 8262105 (-) False XLOC_003917
TCONS_00007505 mRNA upstream 47828 8256292 ~ 8269227 (-) False XLOC_003916
TCONS_00007506 mRNA upstream 58040 8266504 ~ 8269227 (-) False XLOC_003916
TCONS_00007494 other downstream 75647 8111369 ~ 8126195 (-) True XLOC_003913
TCONS_00007477 other downstream 1085479 7116247 ~ 7116363 (-) True XLOC_003904
TCONS_00007463 other downstream 1253824 6944300 ~ 6948018 (-) False XLOC_003898
TCONS_00007456 other downstream 1419766 6780708 ~ 6782076 (-) True XLOC_003894
TCONS_00007441 other downstream 1995253 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007548 other upstream 3117058 11325522 ~ 11331050 (-) False XLOC_003936
TCONS_00007549 other upstream 3122261 11330725 ~ 11331090 (-) True XLOC_003936
TCONS_00007551 other upstream 3130340 11338804 ~ 11339100 (-) True XLOC_003938
TCONS_00007552 other upstream 3159130 11367594 ~ 11367890 (-) True XLOC_003942
TCONS_00007553 other upstream 3161991 11370455 ~ 11370653 (-) True XLOC_003943

Expression Profile

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