RNA id: TCONS_00007502


Basic Information

Item Value
RNA id TCONS_00007502
length 808
RNA type mRNA
GC content 0.43
exon number 2
gene id XLOC_003916
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8221835 ~ 8271374 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ctttttctctgcaGCCTGGTTGTTCCAGACCTGTGTGTAAAGAAGCAGCGTATATGCTAATGCTGAAACATCCTTCAGCAAGCAAACATGTGATAGAAATGTATGAGTGGTTTGATCAACCTGGATTCATTTCACTCGTCATGGAGTACCCCCAACCTTGCGTATCTCTGCGGGACTATATAATCATGCATGACAAACTGTCAGAACGGGTTGCACGTTCCCTGCTGCACCAGTTAGTCCAGGCAATGCAGCACTGTAGTTACCGTGGTGTTTCCCACAACGACATGCATCCTGACAACATCCTAGTCAACACAAcgaaggtggagctcaagctgaTTGACTTCGGTTGTGCTACCAATATCAGAGCAGAAAATTGTCAAGCTGTCGTCTTGGCAAACATCCGGACCGTAGGCAACATGCTGTATTTCATGGTGCATGGAAGATATCCAAAGTACAGCATGTCTGGAACGAAGCGCCACCTTTTGTTTGGTCCCAGTGTATCCAGTGACTGCAGGGATCTGATAGAAAAGTGCATGGAGAGAAAATTGTCAACATTGGGGGACGTCTTACAGCACCAGTGGATGAAGAAGCAGGAGATGGAGGAGCAGGGATGAAGGTAAATACAACTGATCCAGTAGGAAACAACTTTTCTAATACTGGCACACACAAAGCTGATGATGTCACGTtagttttagatttttcattaatCATCTTCACTTTTGCTAATGTGTAACATATTTAAGTGCACTTAAAACTCAAGTATTAAACATGTTTAGCAATAccgttaataaaaaaaaacacatattaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000127202

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007499 lncRNA downstream 17361 8201885 ~ 8204859 (-) True XLOC_003915
TCONS_00007493 lncRNA downstream 124748 8056468 ~ 8097472 (-) False XLOC_003913
TCONS_00007489 lncRNA downstream 425888 7782736 ~ 7796332 (-) False XLOC_003912
TCONS_00008760 lncRNA downstream 435455 7782736 ~ 7786765 (-) False XLOC_003912
TCONS_00007510 lncRNA upstream 15658 8284885 ~ 8285892 (-) True XLOC_003918
TCONS_00007513 lncRNA upstream 207734 8476961 ~ 8515378 (-) False XLOC_003920
TCONS_00008761 lncRNA upstream 207798 8477025 ~ 8515693 (-) False XLOC_003920
TCONS_00007514 lncRNA upstream 214592 8483819 ~ 8515378 (-) False XLOC_003920
TCONS_00008762 lncRNA upstream 214610 8483837 ~ 8515748 (-) False XLOC_003920
TCONS_00007498 mRNA downstream 13756 8201842 ~ 8208464 (-) False XLOC_003915
TCONS_00007495 mRNA downstream 54209 8160894 ~ 8168011 (-) False XLOC_003914
TCONS_00007496 mRNA downstream 54348 8160912 ~ 8167872 (-) False XLOC_003914
TCONS_00007497 mRNA downstream 54421 8161313 ~ 8167799 (-) True XLOC_003914
TCONS_00007492 mRNA downstream 95997 8046645 ~ 8126223 (-) False XLOC_003913
TCONS_00007509 mRNA upstream 15459 8284686 ~ 8288925 (-) False XLOC_003918
TCONS_00007511 mRNA upstream 34714 8303941 ~ 8320868 (-) False XLOC_003919
TCONS_00007512 mRNA upstream 36780 8306007 ~ 8350945 (-) True XLOC_003919
TCONS_00007515 mRNA upstream 366558 8635785 ~ 8782871 (-) True XLOC_003921
TCONS_00007522 mRNA upstream 1294927 9564154 ~ 9948487 (-) False XLOC_003926
TCONS_00007494 other downstream 96025 8111369 ~ 8126195 (-) True XLOC_003913
TCONS_00007477 other downstream 1105857 7116247 ~ 7116363 (-) True XLOC_003904
TCONS_00007463 other downstream 1274202 6944300 ~ 6948018 (-) False XLOC_003898
TCONS_00007456 other downstream 1440144 6780708 ~ 6782076 (-) True XLOC_003894
TCONS_00007441 other downstream 2015631 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007548 other upstream 3056295 11325522 ~ 11331050 (-) False XLOC_003936
TCONS_00007549 other upstream 3061498 11330725 ~ 11331090 (-) True XLOC_003936
TCONS_00007551 other upstream 3069577 11338804 ~ 11339100 (-) True XLOC_003938
TCONS_00007552 other upstream 3098367 11367594 ~ 11367890 (-) True XLOC_003942
TCONS_00007553 other upstream 3101228 11370455 ~ 11370653 (-) True XLOC_003943