XLOC_003923 (CR788237.2)


Basic Information

Item Value
gene id XLOC_003923
gene name CR788237.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 9285823 ~ 9286476 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007519
AGTTTATGGGACCTGCTGTTATGTTCTCCATCATTGCTAGCTCCTGCTGATGTTGTTTTCTGTAATGCGTTCATCTTATACAAACCATTACATCTTATTCATTTCTCACTACCATTACCCATAATTGAGCAATCTGATGATTATgttgaagaaaataaatatttcaaacgtCAACACTTCTCCTGCCCTCCTGATTCTCTGACCGGAATCTGGTCCATATTTGGCCGCCTCAACCAGTGGAAAATTTACATGTAGTAAGGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101839

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007519 True 261 lncRNA 0.39 2 9285823 9286476

Neighbor

gene id symbol gene type direction distance location
XLOC_003921 si:ch211-51h4.2 coding downstream 502952 8635785 ~ 8782871 (-)
XLOC_003920 CR847563.2 coding downstream 770073 8476961 ~ 8515750 (-)
XLOC_003919 si:ch211-247n2.1 coding downstream 934878 8303941 ~ 8350945 (-)
XLOC_003918 pimr202 coding downstream 996898 8284686 ~ 8288925 (-)
XLOC_003917 si:cabz01021066.1 coding downstream 1023718 8239982 ~ 8262105 (-)
XLOC_003924 CR788237.1 coding upstream 5805 9292281 ~ 9293411 (-)
XLOC_003925 NA coding upstream 121195 9407671 ~ 9408005 (-)
XLOC_003926 nlgn1 coding upstream 277678 9564154 ~ 9985415 (-)
XLOC_003927 NA coding upstream 1018654 10305130 ~ 10328527 (-)
XLOC_003928 ect2 coding upstream 1101827 10388303 ~ 10456553 (-)
XLOC_003938 BX324177.10 misc upstream 2052328 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 2081118 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 2083979 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 2094428 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 2097357 11383833 ~ 11384130 (-)
XLOC_003912 NA non-coding downstream 1489491 7773832 ~ 7796332 (-)
XLOC_003908 NA non-coding downstream 1936326 7345800 ~ 7349497 (-)
XLOC_003904 CR925817.2 non-coding downstream 2169460 7116247 ~ 7116363 (-)
XLOC_003895 NA non-coding downstream 2485885 6792546 ~ 6799938 (-)
XLOC_003933 CR678435.1 non-coding upstream 1572548 10859024 ~ 10860106 (-)
XLOC_003939 NA non-coding upstream 2056804 11343280 ~ 11343574 (-)

Expression


Co-expression Network